RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 SPRED3Q2MJR0 410 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 ZC3H12AQ5D1E8 599 aaKnown RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 RBM46Q8TBY0 533 aaKnown RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 CCDC43Q96MW1 224 aaKnown RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 ABCB11O95342 1321 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 NHSQ6T4R5 1651 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 PPIP5K2O43314 1243 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 XRCC5P13010 732 aaKnown RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 HOXA10P31260 410 aaPredicted RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 FNTAP49354 379 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 HDLBPQ00341 1268 aaKnown RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 HAUS3Q68CZ6 603 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 UHMK1Q8TAS1 419 aaKnown RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 DDX47Q9H0S4 455 aaKnown RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 KCTD10Q9H3F6 313 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 OSGEPQ9NPF4 335 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 WRAP73Q9P2S5 460 aaPredicted RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 RABGAP1Q9Y3P9 1069 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 GOLGA8IPA6NC78 632 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 GOLGA8JA6NMD2 632 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 RGL2O15211 777 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 FAM13AO94988 1023 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 UPP2O95045 317 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 MYBL1P10243 752 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 ADRA2BP18089 450 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 ZCWPW2Q504Y3 356 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 AADACL2Q6P093 401 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 GLYCTKQ8IVS8 523 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 CALR3Q96L12 384 aaKnown RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 RNPC3Q96LT9 517 aaKnown RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 DPH5Q9H2P9 285 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 DLEC1Q9Y238 1755 aa12.83□□□□□ -0.35
ERCC1-204ENST00000423698 SMIM23A6NLE4 172 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 MEFVO15553 781 aaPredicted RBP12.83□□□□□ -0.36
ERCC1-204ENST00000423698 NR3C1P04150 777 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 ARP10275 920 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 ITGA4P13612 1032 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 UCHL3P15374 230 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 NPR1P16066 1061 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 MAATS1Q7Z4T9 603 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 TRIM59Q8IWR1 403 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 SYCP3Q8IZU3 236 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 CCDC114Q96M63 670 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 WDR18Q9BV38 432 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 CELF4Q9BZC1 486 aaKnown RBP12.83□□□□□ -0.36
ERCC1-204ENST00000423698 NT5C3AQ9H0P0 336 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 ZNF277Q9NRM2 450 aaPredicted RBP12.83□□□□□ -0.36
ERCC1-204ENST00000423698 SWAP70Q9UH65 585 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
ERCC1-204ENST00000423698 PCDHA2Q9Y5H9 948 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 SHOX2O60902 331 aaPredicted RBP12.83□□□□□ -0.36
ERCC1-204ENST00000423698 CDR1P51861 262 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 HOOK2Q96ED9 719 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 TSGA10Q9BZW7 698 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 CEP72Q9P209 647 aa12.83□□□□□ -0.36
ERCC1-204ENST00000423698 E7EVH7 732 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 SERPING1P05155 500 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 SSTR3P32745 418 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-204ENST00000423698 SOX10P56693 466 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 MTA1Q13330 715 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 NNTQ13423 1086 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 KNOP1Q1ED39 458 aaKnown RBP12.82□□□□□ -0.36
ERCC1-204ENST00000423698 PRAMEF18Q5VWM3 479 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 PPP1R18Q6NYC8 613 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 CCDC13Q8IYE1 715 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 ETNPPLQ8TBG4 499 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 FAXDC2Q96IV6 333 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 AGBL1Q96MI9 1066 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 KCNMB3Q9NPA1 279 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 HAUS2Q9NVX0 235 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 DDX20Q9UHI6 824 aaKnown RBP12.82□□□□□ -0.36
ERCC1-204ENST00000423698 COL24A1Q17RW2 1714 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 A0A1W2PQJ5 194 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 GRID2IPA4D2P6 1211 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 PON1P27169 355 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 ALKBH5Q6P6C2 394 aaKnown RBP12.82□□□□□ -0.36
ERCC1-204ENST00000423698 C15orf52Q6ZUT6 534 aaKnown RBP12.82□□□□□ -0.36
ERCC1-204ENST00000423698 DAAM2Q86T65 1068 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 PALB2Q86YC2 1186 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 LENG9Q96B70 501 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 STIM2Q9P246 746 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 CHUKO15111 745 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 ATMINO43313 823 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-204ENST00000423698 CCNHP51946 323 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-204ENST00000423698 ODR4Q5SWX8 454 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 ANKRD23Q86SG2 305 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 TAF4BQ92750 862 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 TACO1Q9BSH4 297 aaKnown RBP12.82□□□□□ -0.36
ERCC1-204ENST00000423698 KIFC3Q9BVG8 833 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 VIPAS39Q9H9C1 493 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 SLC40A1Q9NP59 571 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 TAS2R14Q9NYV8 317 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 MCM8Q9UJA3 840 aa12.82□□□□□ -0.36
ERCC1-204ENST00000423698 H0YIN7 160 aa12.81□□□□□ -0.36
ERCC1-204ENST00000423698 RAD51CO43502 376 aa12.81□□□□□ -0.36
ERCC1-204ENST00000423698 GAS7O60861 476 aa12.81□□□□□ -0.36
ERCC1-204ENST00000423698 AFPP02771 609 aaKnown RBP12.81□□□□□ -0.36
ERCC1-204ENST00000423698 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms