RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 FBXO21O94952 628 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 CPP00450 1065 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 SNRPB2P08579 225 aaKnown RBP3.79□□□□□ -1.8
LINC00428-201ENST00000415620 ATF3P18847 181 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 RGS19P49795 217 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 HNRNPMP52272 730 aaKnown RBP eCLIP3.79□□□□□ -1.8
LINC00428-201ENST00000415620 GFRA1P56159 465 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 RAC3P60763 192 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 TUBA3CQ13748 450 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 CSRP2Q16527 193 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 VASNQ6EMK4 673 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 TUBA3EQ6PEY2 450 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 GPR155Q7Z3F1 870 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 POLNQ7Z5Q5 900 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 ZNF227Q86WZ6 799 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 ZNF483Q8TF39 744 aaPredicted RBP3.79□□□□□ -1.8
LINC00428-201ENST00000415620 CACTINQ8WUQ7 758 aaKnown RBP3.79□□□□□ -1.8
LINC00428-201ENST00000415620 LARP4BQ92615 738 aaKnown RBP3.79□□□□□ -1.8
LINC00428-201ENST00000415620 CCDC140Q96MF4 163 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 PRRX2Q99811 253 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 GZF1Q9H116 711 aaPredicted RBP3.79□□□□□ -1.8
LINC00428-201ENST00000415620 MMRN2Q9H8L6 949 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 DMRT1Q9Y5R6 373 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 ADGRB3O60242 1522 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 RGPD3A6NKT7 1758 aaPredicted RBP3.79□□□□□ -1.8
LINC00428-201ENST00000415620 RGPD4Q7Z3J3 1758 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 ABCA3Q99758 1704 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 PDE4DIPQ5VU43 2346 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 MAFKO60675 156 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 RAMP2O60895 175 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 DGKIO75912 1065 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 RECKO95980 971 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 ITGAVP06756 1048 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 ACRV1P26436 265 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 ECI1P42126 302 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 NASPP49321 788 aaPredicted RBP3.78□□□□□ -1.8
LINC00428-201ENST00000415620 DUSP8Q13202 625 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 USP10Q14694 798 aaKnown RBP3.78□□□□□ -1.8
LINC00428-201ENST00000415620 SF1Q15637 639 aaKnown RBP3.78□□□□□ -1.8
LINC00428-201ENST00000415620 PRSS53Q2L4Q9 553 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 NBPF8Q3BBV2 869 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 SLC35F1Q5T1Q4 408 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 LRCH2Q5VUJ6 765 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 MAMDC4Q6UXC1 1216 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 UNC5CLQ8IV45 518 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 TRIM48Q8IWZ4 208 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 PPIL6Q8IXY8 311 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 IL17DQ8TAD2 202 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 CLEC4DQ8WXI8 215 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 ABHD8Q96I13 439 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 CHAMP1Q96JM3 812 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 AGAP2Q99490 1192 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 SLC6A20Q9NP91 592 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 CLDND1Q9NY35 253 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 PCDHA2Q9Y5H9 948 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 SLC30A1Q9Y6M5 507 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 NCOA3Q9Y6Q9 1424 aa3.78□□□□□ -1.8
LINC00428-201ENST00000415620 TMEM2Q9UHN6 1383 aa3.77□□□□□ -1.81
LINC00428-201ENST00000415620 SPAG9O60271 1321 aaKnown RBP3.77□□□□□ -1.81
LINC00428-201ENST00000415620 CR2P20023 1033 aa3.77□□□□□ -1.81
LINC00428-201ENST00000415620 DNAJA1P31689 397 aaKnown RBP3.77□□□□□ -1.81
LINC00428-201ENST00000415620 SKIDA1Q1XH10 827 aa3.77□□□□□ -1.81
LINC00428-201ENST00000415620 PHF19Q5T6S3 580 aa3.77□□□□□ -1.81
LINC00428-201ENST00000415620 FNDC7Q5VTL7 733 aa3.77□□□□□ -1.81
LINC00428-201ENST00000415620 FAM9AQ8IZU1 332 aaPredicted RBP3.77□□□□□ -1.81
LINC00428-201ENST00000415620 SEC16BQ96JE7 1060 aa3.77□□□□□ -1.81
LINC00428-201ENST00000415620 AURKAIP1Q9NWT8 199 aaPredicted RBP3.77□□□□□ -1.81
LINC00428-201ENST00000415620 EID1Q9Y6B2 187 aa3.77□□□□□ -1.81
LINC00428-201ENST00000415620 SZT2Q5T011 3432 aa3.77□□□□□ -1.81
LINC00428-201ENST00000415620 MAP3K5Q99683 1374 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 TRPM2O94759 1503 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 COL24A1Q17RW2 1714 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 KRIT1O00522 736 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 SLC27A2O14975 620 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 IL18BPO95998 194 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 CKMP06732 381 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 ZNF888P0CJ79 500 aaPredicted RBP3.76□□□□□ -1.81
LINC00428-201ENST00000415620 FAHP16930 419 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 VAMP1P23763 118 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 HABP4Q5JVS0 413 aaKnown RBP3.76□□□□□ -1.81
LINC00428-201ENST00000415620 PCSK4Q6UW60 755 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 TMEM145Q8NBT3 493 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 PIP4K2CQ8TBX8 421 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 PPP1R14AQ96A00 147 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 CARD11Q9BXL7 1154 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 ZFP69BQ9UJL9 534 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 STRIP2Q9ULQ0 834 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 OAZ3Q9UMX2 235 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 PTPN22Q9Y2R2 807 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 ABCC5O15440 1437 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 DCCP43146 1447 aa3.76□□□□□ -1.81
LINC00428-201ENST00000415620 NEXMIFQ5QGS0 1516 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 WASHC2CQ9Y4E1 1318 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 SBF2Q86WG5 1849 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 CCDC85CA6NKD9 419 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 H0Y858 1186 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 SCAMP3O14828 347 aaKnown RBP3.75□□□□□ -1.81
LINC00428-201ENST00000415620 CDC14BO60729 498 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 HIBADHP31937 336 aaKnown RBP3.75□□□□□ -1.81
LINC00428-201ENST00000415620 GLRBP48167 497 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms