RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 PIGOQ8TEQ8 1089 aa18.38■□□□□ 0.53
LINC00398-201ENST00000414407 MAP7D2Q96T17 732 aa18.38■□□□□ 0.53
LINC00398-201ENST00000414407 CCSER1Q9C0I3 900 aa18.38■□□□□ 0.53
LINC00398-201ENST00000414407 CSRNP2Q9H175 543 aa18.38■□□□□ 0.53
LINC00398-201ENST00000414407 KIAA1024Q9UPX6 916 aa18.38■□□□□ 0.53
LINC00398-201ENST00000414407 DNM3Q9UQ16 869 aa18.38■□□□□ 0.53
LINC00398-201ENST00000414407 SQORQ9Y6N5 450 aa18.38■□□□□ 0.53
LINC00398-201ENST00000414407 CEP290O15078 2479 aa18.37■□□□□ 0.53
LINC00398-201ENST00000414407 CHRNA1P02708 482 aa18.37■□□□□ 0.53
LINC00398-201ENST00000414407 POLGP54098 1239 aaPredicted RBP18.37■□□□□ 0.53
LINC00398-201ENST00000414407 KRT85P78386 507 aa18.37■□□□□ 0.53
LINC00398-201ENST00000414407 GPNMBQ14956 572 aa18.37■□□□□ 0.53
LINC00398-201ENST00000414407 CABP7Q86V35 215 aa18.37■□□□□ 0.53
LINC00398-201ENST00000414407 CCDC43Q96MW1 224 aaKnown RBP18.37■□□□□ 0.53
LINC00398-201ENST00000414407 SH2D3AQ9BRG2 576 aa18.37■□□□□ 0.53
LINC00398-201ENST00000414407 UBE2OQ9C0C9 1292 aaKnown RBP18.37■□□□□ 0.53
LINC00398-201ENST00000414407 SUGCTQ9HAC7 445 aa18.37■□□□□ 0.53
LINC00398-201ENST00000414407 TSHZ2Q9NRE2 1034 aa18.37■□□□□ 0.53
LINC00398-201ENST00000414407 DDX19AQ9NUU7 478 aaKnown RBP18.37■□□□□ 0.53
LINC00398-201ENST00000414407 RCOR1Q9UKL0 485 aa18.37■□□□□ 0.53
LINC00398-201ENST00000414407 RBM19Q9Y4C8 960 aaKnown RBP18.37■□□□□ 0.53
LINC00398-201ENST00000414407 TRPV2Q9Y5S1 764 aa18.37■□□□□ 0.53
LINC00398-201ENST00000414407 A0A1W2PPC1 479 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 NBNO60934 754 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 EYA4O95677 639 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 CTSHP09668 335 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 CLCN3P51790 818 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 MKRN4PQ13434 485 aaPredicted RBP18.36■□□□□ 0.53
LINC00398-201ENST00000414407 MBTPS1Q14703 1052 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 FOXD4L6Q3SYB3 417 aaPredicted RBP18.36■□□□□ 0.53
LINC00398-201ENST00000414407 PSRC1Q6PGN9 363 aaPredicted RBP18.36■□□□□ 0.53
LINC00398-201ENST00000414407 FOXD4L3Q6VB84 417 aaPredicted RBP18.36■□□□□ 0.53
LINC00398-201ENST00000414407 CHRDL2Q6WN34 429 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 FAM43BQ6ZT52 329 aaPredicted RBP18.36■□□□□ 0.53
LINC00398-201ENST00000414407 LRRC71Q8N4P6 559 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 USP38Q8NB14 1042 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 TCP11Q8WWU5 503 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 VWCEQ96DN2 955 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 CALML4Q96GE6 196 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 CDK5RAP3Q96JB5 506 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 CELF4Q9BZC1 486 aaKnown RBP18.36■□□□□ 0.53
LINC00398-201ENST00000414407 TANC1Q9C0D5 1861 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 CDY2AQ9Y6F7 541 aa18.36■□□□□ 0.53
LINC00398-201ENST00000414407 ARHGEF35A5YM69 484 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 CUTAO60888 179 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 EPHB4P54760 987 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 GRB10Q13322 594 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 EMC2Q15006 297 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 TMEM119Q4V9L6 283 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 C16orf59Q7L2K0 433 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 CLIC6Q96NY7 704 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 PNMA5Q96PV4 448 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 MTRQ99707 1265 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 SCAND2PQ9GZW5 306 aaPredicted RBP18.35■□□□□ 0.53
LINC00398-201ENST00000414407 ATP6V0A4Q9HBG4 840 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 PCDH10Q9P2E7 1040 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 AKT3Q9Y243 479 aa18.35■□□□□ 0.53
LINC00398-201ENST00000414407 A0A087WWV3 80 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 ASAP2O43150 1006 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 GPR32O75388 356 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 FGBP02675 491 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 TXLNAP40222 546 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 CRYBB1P53674 252 aaPredicted RBP18.34■□□□□ 0.53
LINC00398-201ENST00000414407 FBXO47Q5MNV8 452 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 TMEM240Q5SV17 173 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 DEFB128Q7Z7B8 93 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 MCPH1Q8NEM0 835 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 SYMPKQ92797 1274 aaKnown RBP18.34■□□□□ 0.53
LINC00398-201ENST00000414407 EPSTI1Q96J88 318 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 BHMT2Q9H2M3 363 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 XPNPEP1Q9NQW7 623 aa18.34■□□□□ 0.53
LINC00398-201ENST00000414407 SUCLA2Q9P2R7 463 aaPredicted RBP18.34■□□□□ 0.53
LINC00398-201ENST00000414407 E9PMD0 336 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 VTNP04004 478 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 ACTN1P12814 892 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 CYP11B2P19099 503 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 GPC3P51654 580 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 TMEM62Q0P6H9 643 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 DRP2Q13474 957 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 PLEKHG4Q58EX7 1191 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 CNKSR3Q6P9H4 555 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 PADI6Q6TGC4 694 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 TSHZ1Q6ZSZ6 1077 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 ZNF365Q70YC5 407 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 PSPC1Q8WXF1 523 aaKnown RBP18.33■□□□□ 0.52
LINC00398-201ENST00000414407 APBB2Q92870 758 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.33■□□□□ 0.52
LINC00398-201ENST00000414407 ADAMTS10Q9H324 1103 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 CCDC39Q9UFE4 941 aa18.33■□□□□ 0.52
LINC00398-201ENST00000414407 EVPLQ92817 2033 aa18.32■□□□□ 0.52
LINC00398-201ENST00000414407 USO1O60763 962 aaKnown RBP18.32■□□□□ 0.52
LINC00398-201ENST00000414407 ACRP10323 421 aa18.32■□□□□ 0.52
LINC00398-201ENST00000414407 NCLP19338 710 aaKnown RBP18.32■□□□□ 0.52
LINC00398-201ENST00000414407 ME1P48163 572 aa18.32■□□□□ 0.52
LINC00398-201ENST00000414407 NLRP11P59045 1033 aaKnown RBP18.32■□□□□ 0.52
LINC00398-201ENST00000414407 MXD4Q14582 209 aaPredicted RBP18.32■□□□□ 0.52
LINC00398-201ENST00000414407 LPIN1Q14693 890 aa18.32■□□□□ 0.52
LINC00398-201ENST00000414407 ZRSR1Q15695 479 aaKnown RBP18.32■□□□□ 0.52
LINC00398-201ENST00000414407 KIZQ2M2Z5 673 aa18.32■□□□□ 0.52
LINC00398-201ENST00000414407 ODR4Q5SWX8 454 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms