RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 XKR3Q5GH77 459 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 MIIPQ5JXC2 388 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 MORN1Q5T089 497 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 PLA2G4FQ68DD2 849 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 TAPT1Q6NXT6 567 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 C17orf99Q6UX52 265 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 FILIP1Q7Z7B0 1213 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 FBXO16Q8IX29 292 aaPredicted RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 MSL3Q8N5Y2 521 aaKnown RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 MYCT1Q8N699 235 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 CCDC102AQ96A19 550 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 DRC1Q96MC2 740 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 PLCD4Q9BRC7 762 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 MRPL44Q9H9J2 332 aaKnown RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 ZNF302Q9NR11 478 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 TAB2Q9NYJ8 693 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 MAGEC2Q9UBF1 373 aaPredicted RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 IVNS1ABPQ9Y6Y0 642 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 A0A1W2PQC6 194 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 OATP04181 439 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 TM4SF4P48230 202 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 XKR9Q5GH70 373 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 WDR78Q5VTH9 848 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 SCFD2Q8WU76 684 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 SEPT1Q8WYJ6 367 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 EMID1Q96A84 441 aaPredicted RBP6.09□□□□□ -1.44
EPHA4-202ENST00000409854 MAML3Q96JK9 1138 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 ZNF830Q96NB3 372 aaPredicted RBP6.09□□□□□ -1.44
EPHA4-202ENST00000409854 GPR20Q99678 358 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 TUBGCP2Q9BSJ2 902 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 ZHX3Q9H4I2 956 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 C17orf75Q9HAS0 396 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 GPBP1L1Q9HC44 474 aaPredicted RBP6.09□□□□□ -1.44
EPHA4-202ENST00000409854 CYP26B1Q9NR63 512 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 PPME1Q9Y570 386 aa6.09□□□□□ -1.44
EPHA4-202ENST00000409854 SFI1A8K8P3 1242 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 TGFB1I1O43294 461 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 CALUO43852 315 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 TLR2O60603 784 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 USO1O60763 962 aaKnown RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 DGAT1O75907 488 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 PRPF6O94906 941 aaKnown RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 GCNT3O95395 438 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 GNA14O95837 355 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 IGHA2P01877 340 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 NMT1P30419 496 aaKnown RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 NPEPPSP55786 919 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 SREBF2Q12772 1141 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 TTLL4Q14679 1199 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 ARID5BQ14865 1188 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 TAF1CQ15572 869 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 TARBP2Q15633 366 aaKnown RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 ODR4Q5SWX8 454 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 STXBP4Q6ZWJ1 553 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 NELFCDQ8IXH7 590 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 FAM178BQ8IXR5 827 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 SLC17A8Q8NDX2 589 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 USP6NLQ92738 828 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 VPS16Q9H269 839 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 TMX1Q9H3N1 280 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 XPNPEP1Q9NQW7 623 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 LARSQ9P2J5 1176 aaKnown RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 N4BP3O15049 544 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 NKRFO15226 690 aaKnown RBP eCLIP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 SLC16A3O15427 465 aaKnown RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 SNAI1O95863 264 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 HOXC6P09630 235 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 TCF7P36402 384 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 KCNJ6P48051 423 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 DNM2P50570 870 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 GTF2BQ00403 316 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 ARHGAP1Q07960 439 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 LRMPQ12912 555 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 MAN2A1Q16706 1144 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 FAM160B1Q5W0V3 765 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 EEPD1Q7L9B9 569 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 PLPPR4Q7Z2D5 763 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 CEP120Q8N960 986 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 MCPH1Q8NEM0 835 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 KIAA1524Q8TCG1 905 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 SPIRE2Q8WWL2 714 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 KIFAP3Q92845 792 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 HVCN1Q96D96 273 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 CEP170P1Q96L14 293 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 NTPCRQ9BSD7 190 aaKnown RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 DHX33Q9H6R0 707 aaKnown RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 RRAGDQ9NQL2 400 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 SEPT9Q9UHD8 586 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 CPA4Q9UI42 421 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 TMEM88BA6NKF7 163 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 FECHP22830 423 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 MSNP26038 577 aaKnown RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 SP4Q02446 784 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 KCNA1Q09470 495 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 TRIM14Q14142 442 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 MYBPC2Q14324 1141 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 HSDL1Q3SXM5 330 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 TMEM139Q8IV31 216 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 SLC9A9Q8IVB4 645 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms