RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 UCHL3P15374 230 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 FKBP1CQ5VVH2 108 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 ARFGAP2Q8N6H7 521 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 OTUD6BQ8N6M0 293 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 PRPF38AQ8NAV1 312 aaKnown RBP21.63■■□□□ 1.05
CCDC47-202ENST00000403162 TRPM4Q8TD43 1214 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 LRRC45Q96CN5 670 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 NAGPAQ9UK23 515 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 NENFQ9UMX5 172 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 ASTN2O75129 1339 aaPredicted RBP21.63■■□□□ 1.05
CCDC47-202ENST00000403162 H0YGN5 161 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 HSD17B3P37058 310 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 CACNB1Q02641 598 aaPredicted RBP21.63■■□□□ 1.05
CCDC47-202ENST00000403162 HLTFQ14527 1009 aaKnown RBP eCLIP21.63■■□□□ 1.05
CCDC47-202ENST00000403162 ARSHQ5FYA8 562 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 GPATCH4Q5T3I0 446 aaKnown RBP21.63■■□□□ 1.05
CCDC47-202ENST00000403162 FAM151AQ8WW52 585 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 SPAG5Q96R06 1193 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 PI4KBQ9UBF8 816 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 NFS1Q9Y697 457 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 CNTNAP1P78357 1384 aa21.62■■□□□ 1.05
CCDC47-202ENST00000403162 PGRMC1O00264 195 aaKnown RBP21.62■■□□□ 1.05
CCDC47-202ENST00000403162 AFPP02771 609 aaKnown RBP21.62■■□□□ 1.05
CCDC47-202ENST00000403162 ACTN1P12814 892 aa21.62■■□□□ 1.05
CCDC47-202ENST00000403162 FNTAP49354 379 aa21.62■■□□□ 1.05
CCDC47-202ENST00000403162 SWT1Q5T5J6 900 aaKnown RBP21.62■■□□□ 1.05
CCDC47-202ENST00000403162 MCTP2Q6DN12 878 aa21.62■■□□□ 1.05
CCDC47-202ENST00000403162 NLRP14Q86W24 1093 aa21.62■■□□□ 1.05
CCDC47-202ENST00000403162 MYCBPAPQ8TBZ2 947 aa21.62■■□□□ 1.05
CCDC47-202ENST00000403162 CEP89Q96ST8 783 aa21.62■■□□□ 1.05
CCDC47-202ENST00000403162 GLT8D2Q9H1C3 349 aa21.62■■□□□ 1.05
CCDC47-202ENST00000403162 YY1AP1Q9H869 796 aa21.62■■□□□ 1.05
CCDC47-202ENST00000403162 ARMCX3Q9UH62 379 aaPredicted RBP21.62■■□□□ 1.05
CCDC47-202ENST00000403162 SCAF8Q9UPN6 1271 aaKnown RBP21.62■■□□□ 1.05
CCDC47-202ENST00000403162 CYP3A7-CYP3A51PA0A087WV96 503 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 CCDC188H7C350 402 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 GCOM1H8Y6P7 765 aaPredicted RBP21.61■■□□□ 1.05
CCDC47-202ENST00000403162 CEP104O60308 925 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 FAM107AO95990 144 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 MYZAPP0CAP1 466 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 SLC9A1P19634 815 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 CYP3A7P24462 503 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 HNRNPH1P31943 449 aaKnown RBP21.61■■□□□ 1.05
CCDC47-202ENST00000403162 ALKBH5Q6P6C2 394 aaKnown RBP21.61■■□□□ 1.05
CCDC47-202ENST00000403162 TPCN2Q8NHX9 752 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 CCT8L2Q96SF2 557 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.61■■□□□ 1.052e-7■■■□□ 17.9
CCDC47-202ENST00000403162 FBXL5Q9UKA1 691 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 A0A0A6YYK5 440 aaPredicted RBP21.61■■□□□ 1.05
CCDC47-202ENST00000403162 FLOT1O75955 427 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 KRT18P05783 430 aaKnown RBP21.61■■□□□ 1.05
CCDC47-202ENST00000403162 PON1P27169 355 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 USP8P40818 1118 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 UAP1Q16222 522 aaPredicted RBP21.61■■□□□ 1.05
CCDC47-202ENST00000403162 EXOC3L4Q17RC7 722 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 FBXW10Q5XX13 1052 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 TTBK2Q6IQ55 1244 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 SLFN11Q7Z7L1 901 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 CLEC10AQ8IUN9 316 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 MBOAT7Q96N66 472 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 CSRNP1Q96S65 589 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 HACL1Q9UJ83 578 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 ATRNL1Q5VV63 1379 aa21.61■■□□□ 1.05
CCDC47-202ENST00000403162 GREB1LQ9C091 1923 aaPredicted RBP21.6■■□□□ 1.05
CCDC47-202ENST00000403162 MED24O75448 989 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 SLURP2P0DP57 97 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 KCNV1Q6PIU1 500 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 EPM2AIP1Q7L775 607 aaPredicted RBP21.6■■□□□ 1.05
CCDC47-202ENST00000403162 FAM83AQ86UY5 434 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 RASGEF1CQ8N431 466 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 TMEM39BQ9GZU3 492 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 POLD4Q9HCU8 107 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 NOC2LQ9Y3T9 749 aaKnown RBP21.6■■□□□ 1.05
CCDC47-202ENST00000403162 SART1O43290 800 aaKnown RBP21.6■■□□□ 1.05
CCDC47-202ENST00000403162 CASP5P51878 434 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 BIRC3Q13489 604 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 KNOP1Q1ED39 458 aaKnown RBP21.6■■□□□ 1.05
CCDC47-202ENST00000403162 SLFN12Q8IYM2 578 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 METTL13Q8N6R0 699 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 RBM46Q8TBY0 533 aaKnown RBP21.6■■□□□ 1.05
CCDC47-202ENST00000403162 LMBR1Q8WVP7 490 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 INTUQ9ULD6 942 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 CAPN7Q9Y6W3 813 aa21.6■■□□□ 1.05
CCDC47-202ENST00000403162 COL2A1P02458 1487 aaPredicted RBP21.59■■□□□ 1.05
CCDC47-202ENST00000403162 FAM196BA6NMK8 535 aa21.59■■□□□ 1.05
CCDC47-202ENST00000403162 USP17L10C9JJH3 530 aa21.59■■□□□ 1.05
CCDC47-202ENST00000403162 MTMR3Q13615 1198 aa21.59■■□□□ 1.05
CCDC47-202ENST00000403162 TNFAIP1Q13829 316 aa21.59■■□□□ 1.05
CCDC47-202ENST00000403162 EPHA7Q15375 998 aa21.59■■□□□ 1.05
CCDC47-202ENST00000403162 MOXD1Q6UVY6 613 aa21.59■■□□□ 1.05
CCDC47-202ENST00000403162 C3orf20Q8ND61 904 aa21.59■■□□□ 1.05
CCDC47-202ENST00000403162 SLITRK6Q9H5Y7 841 aa21.59■■□□□ 1.05
CCDC47-202ENST00000403162 SUCLA2Q9P2R7 463 aaPredicted RBP21.59■■□□□ 1.05
CCDC47-202ENST00000403162 STXBP5LQ9Y2K9 1186 aa21.59■■□□□ 1.05
CCDC47-202ENST00000403162 GLTPD2A6NH11 291 aa21.58■■□□□ 1.05
CCDC47-202ENST00000403162 PDXKO00764 312 aa21.58■■□□□ 1.05
CCDC47-202ENST00000403162 JAM2P57087 298 aa21.58■■□□□ 1.05
CCDC47-202ENST00000403162 GIT2Q14161 759 aa21.58■■□□□ 1.05
CCDC47-202ENST00000403162 RASA3Q14644 834 aa21.58■■□□□ 1.05
CCDC47-202ENST00000403162 RUFY4Q6ZNE9 571 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms