RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SFI1A8K8P3 1242 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 MAP1SQ66K74 1059 aaPredicted RBP15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 SCYL3Q8IZE3 742 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 BANK1Q8NDB2 785 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 BCAP29Q9UHQ4 241 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 ALDH1A1P00352 501 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 LIFRP42702 1097 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 DBN1Q16643 649 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 KCNV1Q6PIU1 500 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 FBXO18Q8NFZ0 1043 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 MED7O43513 233 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 ARL4AP40617 200 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 CCDC38Q502W7 563 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 LRRC8CQ8TDW0 803 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 BCL2L12Q9HB09 334 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 NEDD4P46934 1319 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 GPC4O75487 556 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 DARS2Q6PI48 645 aaKnown RBP15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 PCDHA5Q9Y5H7 936 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 SLC25A27O95847 323 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 CPP00450 1065 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 KCNJ6P48051 423 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 CXCL9Q07325 125 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 C2orf54Q08AI8 447 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 KCTD16Q68DU8 428 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 USP50Q70EL3 339 aaPredicted RBP15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 RAB44Q7Z6P3 723 aaPredicted RBP15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 PDZD8Q8NEN9 1154 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 CDC26Q8NHZ8 85 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 P2RX5Q93086 422 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 SH3GLB2Q9NR46 395 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 GCNT4Q9P109 453 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 SERPINB6P35237 376 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 ASPHQ12797 758 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 TRIP13Q15645 432 aaPredicted RBP15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 ARMCX2Q7L311 632 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 SEC31AO94979 1220 aaKnown RBP15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 TCP1P17987 556 aaKnown RBP15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 EEF1GP26641 437 aaKnown RBP15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 PEX3P56589 373 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 PPP1R18Q6NYC8 613 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 C11orf57Q6ZUT1 292 aaPredicted RBP15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 GINM1Q9NU53 330 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 RGS12O14924 1447 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 CXCR5P32302 372 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 BASP1P80723 227 aaKnown RBP15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 RCN2Q14257 317 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 CFAP61Q8NHU2 1237 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 TMEM206Q9H813 350 aa15.34■□□□□ 0.05
PCDHA11-201ENST00000398640 A0A1B0GUA9 196 aa15.33■□□□□ 0.05
PCDHA11-201ENST00000398640 GOLGA8KD6RF30 607 aa15.33■□□□□ 0.05
PCDHA11-201ENST00000398640 K7ERI5 159 aa15.33■□□□□ 0.05
PCDHA11-201ENST00000398640 SPDL1Q96EA4 605 aa15.33■□□□□ 0.05
PCDHA11-201ENST00000398640 CFAP36Q96G28 342 aa15.33■□□□□ 0.05
PCDHA11-201ENST00000398640 PYCARDQ9ULZ3 195 aa15.33■□□□□ 0.05
PCDHA11-201ENST00000398640 KIF13AQ9H1H9 1805 aa15.33■□□□□ 0.05
PCDHA11-201ENST00000398640 CD2BP2O95400 341 aaKnown RBP15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 RARBP10826 455 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 IFNAR2P48551 515 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 AFG1LQ8WV93 481 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 TEX13BQ9BXU2 312 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 HAUS4Q9H6D7 363 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 ARHGEF28Q8N1W1 1705 aaKnown RBP15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 PNPLA7Q6ZV29 1317 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 NEMP1O14524 444 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 SOX5P35711 763 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 SGO2Q562F6 1265 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 CYP4F22Q6NT55 531 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 DNAJC24Q6P3W2 148 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 ARHGEF18Q6ZSZ5 1173 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 TBC1D10CQ8IV04 446 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 BBOF1Q8ND07 529 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 LRGUKQ96M69 825 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 ZNF302Q9NR11 478 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 NMT2O60551 498 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 C12orf60Q5U649 245 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 TEX2Q8IWB9 1127 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 PPP1R13BQ96KQ4 1090 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 AK8Q96MA6 479 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 MROH1Q8NDA8 1641 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 PLEKHA8P1O95397 391 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 THOC5Q13769 683 aaKnown RBP15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 PDIA6Q15084 440 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 PPP2R5EQ16537 467 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 HVCN1Q96D96 273 aa15.33■□□□□ 0.04
PCDHA11-201ENST00000398640 MCF2LO15068 1137 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 N4BP2L2Q92802 583 aaPredicted RBP15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 TTC1Q99614 292 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 MMTAG2Q9BU76 263 aaKnown RBP15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 SYNDIG1Q9H7V2 258 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 TBC1D22BQ9NU19 505 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 PPP1R12AO14974 1030 aaPredicted RBP15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 OPHN1O60890 802 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 MOCS3O95396 460 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 GRM4Q14833 912 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 ADGRF4Q8IZF3 695 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 NEDD1Q8NHV4 660 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 PIGOQ8TEQ8 1089 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 NVLO15381 856 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms