RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PPP1R3GB7ZBB8 358 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 CPT1AP50416 773 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 IGBP1P78318 339 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 FSCN1Q16658 493 aaKnown RBP23.47■■□□□ 1.35
CPNE1-204ENST00000397443 DAW1Q8N136 415 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 SH3TC2Q8TF17 1288 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 NIFKQ9BYG3 293 aaKnown RBP23.47■■□□□ 1.35
CPNE1-204ENST00000397443 PARVGQ9HBI0 331 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 DACH1Q9UI36 760 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 CTNND2Q9UQB3 1225 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 SYNRGQ9UMZ2 1314 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 SLC26A2P50443 739 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 EHHADHQ08426 723 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 MAPK7Q13164 816 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 BRDTQ58F21 947 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-204ENST00000397443 SLAIN1Q8ND83 568 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 ATP6V0A4Q9HBG4 840 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 ODF2LQ9ULJ1 636 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 Q9Y3F1 56 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 DGAT1O75907 488 aa23.46■■□□□ 1.35
CPNE1-204ENST00000397443 MYCP01106 439 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-204ENST00000397443 HOXD8P13378 290 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-204ENST00000397443 PRMT2P55345 433 aa23.46■■□□□ 1.35
CPNE1-204ENST00000397443 EMC2Q15006 297 aa23.46■■□□□ 1.35
CPNE1-204ENST00000397443 ODR4Q5SWX8 454 aa23.46■■□□□ 1.35
CPNE1-204ENST00000397443 ZBTB10Q96DT7 871 aa23.46■■□□□ 1.35
CPNE1-204ENST00000397443 MRPL44Q9H9J2 332 aaKnown RBP23.46■■□□□ 1.35
CPNE1-204ENST00000397443 GRPEL1Q9HAV7 217 aa23.46■■□□□ 1.35
CPNE1-204ENST00000397443 BECN2A8MW95 431 aa23.45■■□□□ 1.35
CPNE1-204ENST00000397443 GNASQ5JWF2 1037 aa23.45■■□□□ 1.35
CPNE1-204ENST00000397443 MAP3K21Q5TCX8 1036 aa23.45■■□□□ 1.35
CPNE1-204ENST00000397443 DHX40Q8IX18 779 aaKnown RBP23.45■■□□□ 1.35
CPNE1-204ENST00000397443 SLC7A3Q8WY07 619 aa23.45■■□□□ 1.35
CPNE1-204ENST00000397443 TMEM143Q96AN5 459 aa23.45■■□□□ 1.35
CPNE1-204ENST00000397443 XPNPEP3Q9NQH7 507 aa23.45■■□□□ 1.35
CPNE1-204ENST00000397443 XPNPEP1Q9NQW7 623 aa23.45■■□□□ 1.35
CPNE1-204ENST00000397443 ZBTB42B2RXF5 422 aa23.45■■□□□ 1.34
CPNE1-204ENST00000397443 HBP1O60381 514 aa23.45■■□□□ 1.34
CPNE1-204ENST00000397443 TBC1D8BQ0IIM8 1120 aa23.45■■□□□ 1.34
CPNE1-204ENST00000397443 IQCB1Q15051 598 aa23.45■■□□□ 1.34
CPNE1-204ENST00000397443 TARBP2Q15633 366 aaKnown RBP23.45■■□□□ 1.34
CPNE1-204ENST00000397443 PCDHA2Q9Y5H9 948 aa23.45■■□□□ 1.34
CPNE1-204ENST00000397443 CAVIN2O95810 425 aa23.44■■□□□ 1.34
CPNE1-204ENST00000397443 INSRRP14616 1297 aa23.44■■□□□ 1.34
CPNE1-204ENST00000397443 GAP43P17677 238 aa23.44■■□□□ 1.34
CPNE1-204ENST00000397443 CASP5P51878 434 aa23.44■■□□□ 1.34
CPNE1-204ENST00000397443 PSMD2Q13200 908 aa23.44■■□□□ 1.34
CPNE1-204ENST00000397443 STIM1Q13586 685 aa23.44■■□□□ 1.34
CPNE1-204ENST00000397443 ADSSL1Q8N142 457 aa23.44■■□□□ 1.34
CPNE1-204ENST00000397443 SUGCTQ9HAC7 445 aa23.44■■□□□ 1.34
CPNE1-204ENST00000397443 SPC25Q9HBM1 224 aa23.44■■□□□ 1.34
CPNE1-204ENST00000397443 GCNT3O95395 438 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 NMT1P30419 496 aaKnown RBP23.43■■□□□ 1.34
CPNE1-204ENST00000397443 GJA9P57773 515 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 NELFBQ8WX92 580 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 DRC1Q96MC2 740 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 CEP89Q96ST8 783 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 POLR3FQ9H1D9 316 aaPredicted RBP23.43■■□□□ 1.34
CPNE1-204ENST00000397443 DHX33Q9H6R0 707 aaKnown RBP23.43■■□□□ 1.34
CPNE1-204ENST00000397443 MYBP10242 640 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 ZNF131P52739 623 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 KIAA0753Q2KHM9 967 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 NELFCDQ8IXH7 590 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 FAM178BQ8IXR5 827 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 MCPH1Q8NEM0 835 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 KAT2BQ92831 832 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 PDLIM7Q9NR12 457 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 PTPN22Q9Y2R2 807 aa23.43■■□□□ 1.34
CPNE1-204ENST00000397443 GOLGA6L19H0YKK7 550 aa23.42■■□□□ 1.34
CPNE1-204ENST00000397443 PEX3P56589 373 aa23.42■■□□□ 1.34
CPNE1-204ENST00000397443 PAK1Q13153 545 aa23.42■■□□□ 1.34
CPNE1-204ENST00000397443 LRRC71Q8N4P6 559 aa23.42■■□□□ 1.34
CPNE1-204ENST00000397443 MED15Q96RN5 788 aa23.42■■□□□ 1.34
CPNE1-204ENST00000397443 DDX20Q9UHI6 824 aaKnown RBP23.42■■□□□ 1.34
CPNE1-204ENST00000397443 TRIM49BA6NDI0 452 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 F2P00734 622 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 RFC5P40937 340 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 PLCB2Q00722 1185 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 DRP2Q13474 957 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 ZC2HC1CQ53FD0 456 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-204ENST00000397443 HSP90AA4PQ58FG1 418 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 METTL13Q8N6R0 699 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 BSNDQ8WZ55 320 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 BPIFA3Q9BQP9 254 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 TIPINQ9BVW5 301 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 HMX1Q9NP08 348 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-204ENST00000397443 LARSQ9P2J5 1176 aaKnown RBP23.41■■□□□ 1.34
CPNE1-204ENST00000397443 KAT6AQ92794 2004 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 PSMA7O14818 248 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 PLS3P13797 630 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 PMS1P54277 932 aaKnown RBP23.41■■□□□ 1.34
CPNE1-204ENST00000397443 PPFIA1Q13136 1202 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 MFSD10Q14728 455 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 CXCL17Q6UXB2 119 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 KSR1Q8IVT5 923 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 MYOCDQ8IZQ8 938 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 KIFAP3Q92845 792 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 KIFC3Q9BVG8 833 aa23.41■■□□□ 1.34
CPNE1-204ENST00000397443 CCDC169A6NNP5 214 aa23.4■■□□□ 1.34
CPNE1-204ENST00000397443 K7ENM7 598 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms