RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 STAT5BP51692 787 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 RNF187Q5TA31 235 aaPredicted RBP15.72■□□□□ 0.11
TCOF1-202ENST00000377797 FRMD5Q7Z6J6 570 aa15.72■□□□□ 0.11
TCOF1-202ENST00000377797 MYBP10242 640 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 CYP11B2P19099 503 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 VCAM1P19320 739 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 CCDC91Q7Z6B0 441 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 CHP1Q99653 195 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 PPP1R9AQ9ULJ8 1098 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 XKR3Q5GH77 459 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 FKBP1CQ5VVH2 108 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 E4F1Q66K89 784 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-202ENST00000377797 MAIP1Q8WWC4 291 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 SELENOSQ9BQE4 189 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 RAB17Q9H0T7 212 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 KIAA1586Q9HCI6 787 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 FEZ2Q9UHY8 353 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-202ENST00000377797 ATF7P17544 494 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-202ENST00000377797 POTEAQ6S8J7 498 aa15.71■□□□□ 0.11
TCOF1-202ENST00000377797 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-202ENST00000377797 NFIBO00712 420 aa15.71■□□□□ 0.1
TCOF1-202ENST00000377797 DDNO94850 711 aaPredicted RBP15.71■□□□□ 0.1
TCOF1-202ENST00000377797 GUCY2FP51841 1108 aa15.71■□□□□ 0.1
TCOF1-202ENST00000377797 GFPT1Q06210 699 aaPredicted RBP15.71■□□□□ 0.1
TCOF1-202ENST00000377797 ZC2HC1CQ53FD0 456 aaPredicted RBP15.71■□□□□ 0.1
TCOF1-202ENST00000377797 TC2NQ8N9U0 490 aa15.71■□□□□ 0.1
TCOF1-202ENST00000377797 RNF34Q969K3 372 aa15.71■□□□□ 0.1
TCOF1-202ENST00000377797 PAIP2Q9BPZ3 127 aaKnown RBP15.71■□□□□ 0.1
TCOF1-202ENST00000377797 POLR3CQ9BUI4 534 aaPredicted RBP15.71■□□□□ 0.1
TCOF1-202ENST00000377797 DGAT1O75907 488 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 TXNP10599 105 aaKnown RBP15.7■□□□□ 0.1
TCOF1-202ENST00000377797 PLA2G4FQ68DD2 849 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 SYT2Q8N9I0 419 aaPredicted RBP15.7■□□□□ 0.1
TCOF1-202ENST00000377797 TLR3O15455 904 aaKnown RBP15.7■□□□□ 0.1
TCOF1-202ENST00000377797 ARP10275 920 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 NPEPPSP55786 919 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 PPP2R5EQ16537 467 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 C9orf131Q5VYM1 1079 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 RPF1Q9H9Y2 349 aaKnown RBP15.7■□□□□ 0.1
TCOF1-202ENST00000377797 AGPAT5Q9NUQ2 364 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 CD2APQ9Y5K6 639 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 ZRSR2Q15696 482 aaKnown RBP15.7■□□□□ 0.1
TCOF1-202ENST00000377797 EDRF1Q3B7T1 1238 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 RHPN2Q8IUC4 686 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 PARP2Q9UGN5 583 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 MAFGO15525 162 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 AP5Z1O43299 807 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 IFNB1P01574 187 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 LLGL1Q15334 1064 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 LRRC37A3O60309 1634 aa15.7■□□□□ 0.1
TCOF1-202ENST00000377797 MAPK4P31152 587 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 DRAP1Q14919 205 aaPredicted RBP15.69■□□□□ 0.1
TCOF1-202ENST00000377797 SURF1Q15526 300 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 TAF12Q16514 161 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 MICALCLQ6ZW33 695 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 KRT12Q99456 494 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 EDEM3Q9BZQ6 932 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 DPH5Q9H2P9 285 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 ADARB2Q9NS39 739 aaKnown RBP15.69■□□□□ 0.1
TCOF1-202ENST00000377797 KCND2Q9NZV8 630 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 EMSYQ7Z589 1322 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 A0A087X0B3 334 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 EZRP15311 586 aaKnown RBP15.69■□□□□ 0.1
TCOF1-202ENST00000377797 HPDP32754 393 aaPredicted RBP15.69■□□□□ 0.1
TCOF1-202ENST00000377797 VPS41P49754 854 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 GUCY2DQ02846 1103 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 PHRF1Q9P1Y6 1649 aaKnown RBP15.69■□□□□ 0.1
TCOF1-202ENST00000377797 ASB14A6NK59 587 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 ZMYND10O75800 440 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 SNAPC2Q13487 334 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 SCYL2Q6P3W7 929 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 CYP2W1Q8TAV3 490 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 ZNF384Q8TF68 577 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 MKL1Q969V6 931 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 DAPK3O43293 454 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 XPOTO43592 962 aaKnown RBP15.69■□□□□ 0.1
TCOF1-202ENST00000377797 ONECUT3O60422 494 aaPredicted RBP15.69■□□□□ 0.1
TCOF1-202ENST00000377797 STAM2O75886 525 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 FUT2Q10981 343 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 IQCGQ9H095 443 aaKnown RBP15.69■□□□□ 0.1
TCOF1-202ENST00000377797 KIAA1683Q9H0B3 1180 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 RAB20Q9NX57 234 aa15.69■□□□□ 0.1
TCOF1-202ENST00000377797 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.69■□□□□ 0.1
TCOF1-202ENST00000377797 ITIH6Q6UXX5 1313 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 GRIN3BO60391 1043 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 NCAPHQ15003 741 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 XRRA1Q6P2D8 792 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 SCARA5Q6ZMJ2 495 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 CATSPER4Q7RTX7 472 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 RSPH3Q86UC2 560 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 CHST13Q8NET6 341 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 SEPT1Q8WYJ6 367 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 IRX2Q9BZI1 471 aaPredicted RBP15.68■□□□□ 0.1
TCOF1-202ENST00000377797 CALCOCO1Q9P1Z2 691 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 EIF3CLB5ME19 914 aaKnown RBP15.68■□□□□ 0.1
TCOF1-202ENST00000377797 RNF8O76064 485 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 ATP2A2P16615 1042 aaKnown RBP15.68■□□□□ 0.1
TCOF1-202ENST00000377797 HADHQ16836 314 aaKnown RBP15.68■□□□□ 0.1
TCOF1-202ENST00000377797 RINT1Q6NUQ1 792 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 PHLDB2Q86SQ0 1253 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms