RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 PPME1Q9Y570 386 aa23.68■■□□□ 1.38
CBWD3-202ENST00000377342 NRCAMQ92823 1304 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 GTPBP6O43824 516 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-202ENST00000377342 CACNB1Q02641 598 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-202ENST00000377342 RAD51AP2Q09MP3 1159 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 DPYDQ12882 1025 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 SKOR2Q2VWA4 1001 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-202ENST00000377342 COL13A1Q5TAT6 717 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-202ENST00000377342 CNNM4Q6P4Q7 775 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 SESTD1Q86VW0 696 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 DIS3LQ8TF46 1054 aaKnown RBP23.67■■□□□ 1.38
CBWD3-202ENST00000377342 C7orf25Q9BPX7 421 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 KCND2Q9NZV8 630 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 GTF2IRD1Q9UHL9 959 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 IGKV6-21A0A0C4DH24 114 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 MAFO75444 373 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-202ENST00000377342 DGAT1O75907 488 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 GUCY2CP25092 1073 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 RFC5P40937 340 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 POLGP54098 1239 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-202ENST00000377342 SOX10P56693 466 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 MAPK7Q13164 816 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 ITGA7Q13683 1181 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 NFRKBQ6P4R8 1299 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 DYMQ7RTS9 669 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 DAW1Q8N136 415 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 C7orf31Q8N865 590 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 TMEM106CQ9BVX2 250 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 STARD7Q9NQZ5 370 aa23.67■■□□□ 1.38
CBWD3-202ENST00000377342 MBLAC1A4D2B0 266 aaPredicted RBP23.66■■□□□ 1.38
CBWD3-202ENST00000377342 RSPH10B2B2RC85 870 aa23.66■■□□□ 1.38
CBWD3-202ENST00000377342 RSPH10BP0C881 870 aa23.66■■□□□ 1.38
CBWD3-202ENST00000377342 COL6A1P12109 1028 aa23.66■■□□□ 1.38
CBWD3-202ENST00000377342 TBC1D8BQ0IIM8 1120 aa23.66■■□□□ 1.38
CBWD3-202ENST00000377342 GIT2Q14161 759 aa23.66■■□□□ 1.38
CBWD3-202ENST00000377342 CCDC183Q5T5S1 534 aa23.66■■□□□ 1.38
CBWD3-202ENST00000377342 LINC01465Q8N7H1 131 aa23.66■■□□□ 1.38
CBWD3-202ENST00000377342 ANKLE1Q8NAG6 615 aa23.66■■□□□ 1.38
CBWD3-202ENST00000377342 ATP6V0A4Q9HBG4 840 aa23.66■■□□□ 1.38
CBWD3-202ENST00000377342 POLD4Q9HCU8 107 aa23.66■■□□□ 1.38
CBWD3-202ENST00000377342 GPRC5CQ9NQ84 441 aa23.66■■□□□ 1.38
CBWD3-202ENST00000377342 MYL1P05976 194 aa23.65■■□□□ 1.38
CBWD3-202ENST00000377342 ZNF200P98182 395 aaPredicted RBP23.65■■□□□ 1.38
CBWD3-202ENST00000377342 AMPD3Q01432 767 aa23.65■■□□□ 1.38
CBWD3-202ENST00000377342 MKRN4PQ13434 485 aaPredicted RBP23.65■■□□□ 1.38
CBWD3-202ENST00000377342 DRP2Q13474 957 aa23.65■■□□□ 1.38
CBWD3-202ENST00000377342 GDF6Q6KF10 455 aaPredicted RBP23.65■■□□□ 1.38
CBWD3-202ENST00000377342 MTHFD1LQ6UB35 978 aa23.65■■□□□ 1.38
CBWD3-202ENST00000377342 SLC43A3Q8NBI5 491 aa23.65■■□□□ 1.38
CBWD3-202ENST00000377342 SLC7A3Q8WY07 619 aa23.65■■□□□ 1.38
CBWD3-202ENST00000377342 TUBE1Q9UJT0 475 aa23.65■■□□□ 1.38
CBWD3-202ENST00000377342 MKI67P46013 3256 aaKnown RBP23.65■■□□□ 1.38
CBWD3-202ENST00000377342 C17orf102A2RUQ5 167 aa23.64■■□□□ 1.38
CBWD3-202ENST00000377342 RRN3P2A6NIE6 340 aa23.64■■□□□ 1.38
CBWD3-202ENST00000377342 KLRC1P26715 233 aa23.64■■□□□ 1.38
CBWD3-202ENST00000377342 RBM43Q6ZSC3 357 aaKnown RBP23.64■■□□□ 1.38
CBWD3-202ENST00000377342 LRRC71Q8N4P6 559 aa23.64■■□□□ 1.38
CBWD3-202ENST00000377342 CTAGE1Q96RT6 745 aa23.64■■□□□ 1.38
CBWD3-202ENST00000377342 LRRC27Q9C0I9 530 aa23.64■■□□□ 1.38
CBWD3-202ENST00000377342 A0A0U1RQG5 324 aaPredicted RBP23.64■■□□□ 1.37
CBWD3-202ENST00000377342 FRMD3A2A2Y4 597 aa23.64■■□□□ 1.37
CBWD3-202ENST00000377342 KLRC4O43908 158 aa23.64■■□□□ 1.37
CBWD3-202ENST00000377342 HIP1RO75146 1068 aa23.64■■□□□ 1.37
CBWD3-202ENST00000377342 ASIC1P78348 528 aa23.64■■□□□ 1.37
CBWD3-202ENST00000377342 FAM47CQ5HY64 1035 aa23.64■■□□□ 1.37
CBWD3-202ENST00000377342 MAEAQ7L5Y9 396 aa23.64■■□□□ 1.37
CBWD3-202ENST00000377342 MCPH1Q8NEM0 835 aa23.64■■□□□ 1.37
CBWD3-202ENST00000377342 SPATA20Q8TB22 786 aa23.64■■□□□ 1.37
CBWD3-202ENST00000377342 CCDC34Q96HJ3 373 aa23.64■■□□□ 1.37
CBWD3-202ENST00000377342 SIP14410 1827 aa23.63■■□□□ 1.37
CBWD3-202ENST00000377342 TREHO43280 583 aa23.63■■□□□ 1.37
CBWD3-202ENST00000377342 VTI1AQ96AJ9 217 aa23.63■■□□□ 1.37
CBWD3-202ENST00000377342 ODF2LQ9ULJ1 636 aa23.63■■□□□ 1.37
CBWD3-202ENST00000377342 PCDHA5Q9Y5H7 936 aa23.63■■□□□ 1.37
CBWD3-202ENST00000377342 KRT18P05783 430 aaKnown RBP23.62■■□□□ 1.37
CBWD3-202ENST00000377342 CLCN3P51790 818 aa23.62■■□□□ 1.37
CBWD3-202ENST00000377342 ZNF131P52739 623 aa23.62■■□□□ 1.37
CBWD3-202ENST00000377342 RUFY4Q6ZNE9 571 aa23.62■■□□□ 1.37
CBWD3-202ENST00000377342 TMEM143Q96AN5 459 aa23.62■■□□□ 1.37
CBWD3-202ENST00000377342 TIPINQ9BVW5 301 aa23.62■■□□□ 1.37
CBWD3-202ENST00000377342 HOOK1Q9UJC3 728 aaKnown RBP23.62■■□□□ 1.37
CBWD3-202ENST00000377342 MAGEB2O15479 319 aa23.61■■□□□ 1.37
CBWD3-202ENST00000377342 PTPN11Q06124 597 aaPredicted RBP23.61■■□□□ 1.37
CBWD3-202ENST00000377342 EHHADHQ08426 723 aa23.61■■□□□ 1.37
CBWD3-202ENST00000377342 BSNDQ8WZ55 320 aa23.61■■□□□ 1.37
CBWD3-202ENST00000377342 SENP6Q9GZR1 1112 aaPredicted RBP23.61■■□□□ 1.37
CBWD3-202ENST00000377342 ALPK3Q96L96 1907 aa23.61■■□□□ 1.37
CBWD3-202ENST00000377342 ARVCFO00192 962 aa23.6■■□□□ 1.37
CBWD3-202ENST00000377342 GAS2O43903 313 aaKnown RBP23.6■■□□□ 1.37
CBWD3-202ENST00000377342 RPN1P04843 607 aaKnown RBP23.6■■□□□ 1.37
CBWD3-202ENST00000377342 SARSP49591 514 aaKnown RBP23.6■■□□□ 1.37
CBWD3-202ENST00000377342 CDK7P50613 346 aa23.6■■□□□ 1.37
CBWD3-202ENST00000377342 FAM102BQ5T8I3 360 aa23.6■■□□□ 1.37
CBWD3-202ENST00000377342 NT5DC1Q5TFE4 455 aa23.6■■□□□ 1.37
CBWD3-202ENST00000377342 EFCAB12Q6NXP0 572 aa23.6■■□□□ 1.37
CBWD3-202ENST00000377342 UNC13DQ70J99 1090 aa23.6■■□□□ 1.37
CBWD3-202ENST00000377342 SYAP1Q96A49 352 aaPredicted RBP23.6■■□□□ 1.37
CBWD3-202ENST00000377342 POLR3FQ9H1D9 316 aaPredicted RBP23.6■■□□□ 1.37
CBWD3-202ENST00000377342 SUGCTQ9HAC7 445 aa23.6■■□□□ 1.37
CBWD3-202ENST00000377342 PCDHA2Q9Y5H9 948 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms