RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 IGF2BP3O00425 579 aaKnown RBP eCLIP7.06□□□□□ -1.28
UBR4-204ENST00000375254 PSMD14O00487 310 aa7.06□□□□□ -1.28
UBR4-204ENST00000375254 ADCY6O43306 1168 aa7.06□□□□□ -1.28
UBR4-204ENST00000375254 FAM58BPP0C7Q3 252 aa7.06□□□□□ -1.28
UBR4-204ENST00000375254 PSMC3P17980 439 aa7.06□□□□□ -1.28
UBR4-204ENST00000375254 CBX3Q13185 183 aa7.06□□□□□ -1.28
UBR4-204ENST00000375254 NYAP1Q6ZVC0 841 aa7.06□□□□□ -1.28
UBR4-204ENST00000375254 SNIP1Q8TAD8 396 aaKnown RBP7.06□□□□□ -1.28
UBR4-204ENST00000375254 SCFD1Q8WVM8 642 aa7.06□□□□□ -1.28
UBR4-204ENST00000375254 SNF8Q96H20 258 aa7.06□□□□□ -1.28
UBR4-204ENST00000375254 BTBD3Q9Y2F9 522 aa7.06□□□□□ -1.28
UBR4-204ENST00000375254 MAGEB16A2A368 324 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 SPDYE3A6NKU9 549 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 KPNA7A9QM74 516 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 RNF113AO15541 343 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 BRAFP15056 766 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 KCTD17Q8N5Z5 321 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 NDUFA8P51970 172 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 CCZ1BP86790 482 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 CCZ1P86791 482 aaPredicted RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 ZC2HC1CQ53FD0 456 aaPredicted RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 LPCAT2Q7L5N7 544 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 BORCS5Q969J3 196 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 HDAC11Q96DB2 347 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 SCYL1Q96KG9 808 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 FAM47DPA6NHR8 397 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 PABPC1P11940 636 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 CCT3P49368 545 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 TAF2Q6P1X5 1199 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 MTHFD1LQ6UB35 978 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 DENND6AQ8IWF6 608 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 RBM41Q96IZ5 413 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 SERPINB12Q96P63 405 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 MXD3Q9BW11 206 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 CCDC8Q9H0W5 538 aaPredicted RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 DAPK3O43293 454 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 SF3A3Q12874 501 aaKnown RBP eCLIP7.05□□□□□ -1.282e-6■■■■□ 24.7
UBR4-204ENST00000375254 STAM2O75886 525 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 CYP4A11Q02928 519 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 CYP4A22Q5TCH4 519 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 ELMSAN1Q6PJG2 1045 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 RHOT2Q8IXI1 618 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 GIPC3Q8TF64 312 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 MTMR7Q9Y216 660 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 ADGRG1Q9Y653 693 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 MAML1Q92585 1016 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 SNTNA6NMZ2 147 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 MRPL1Q9BYD6 325 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 OSBPL8Q9BZF1 889 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 TOMM70O94826 608 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 KIF22Q14807 665 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 ATP13A5Q4VNC0 1218 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 SDE2Q6IQ49 451 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 SHQ1Q6PI26 577 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 RNASE11Q8TAA1 199 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 BARX2Q9UMQ3 279 aaPredicted RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 COPEO14579 308 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 DDX5P17844 614 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 TRIM71Q2Q1W2 868 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 TMIEQ8NEW7 156 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 MRRFQ96E11 262 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 APPL1Q9UKG1 709 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 PCDHA5Q9Y5H7 936 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 A0A1W2PQC6 194 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 PIK3R2O00459 728 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 MFN2O95140 757 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 FUKQ8N0W3 1084 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 RAB21Q9UL25 225 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 TOM1L1O75674 476 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 CHRNA3P32297 505 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 AP1S2P56377 157 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 ARL4CP56559 192 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 PPP4R3CPQ6ZMV5 832 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 AP3B1O00203 1094 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 NBNO60934 754 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 NPTXRO95502 500 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 TP53BP2Q13625 1128 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 ZBTB18Q99592 522 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 WDR12Q9GZL7 423 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 RPRD1BQ9NQG5 326 aaKnown RBP7.05□□□□□ -1.28
UBR4-204ENST00000375254 UVRAGQ9P2Y5 699 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 AFG3L2Q9Y4W6 797 aa7.05□□□□□ -1.28
UBR4-204ENST00000375254 F8W8V4 182 aa7.04□□□□□ -1.28
UBR4-204ENST00000375254 STK32AQ8WU08 396 aa7.04□□□□□ -1.28
UBR4-204ENST00000375254 CFAP99D6REC4 459 aa7.04□□□□□ -1.28
UBR4-204ENST00000375254 SKAP2O75563 359 aaPredicted RBP7.04□□□□□ -1.28
UBR4-204ENST00000375254 KYNUQ16719 465 aa7.04□□□□□ -1.28
UBR4-204ENST00000375254 RTL9Q8NET4 1388 aa7.04□□□□□ -1.28
UBR4-204ENST00000375254 ENC1O14682 589 aa7.04□□□□□ -1.28
UBR4-204ENST00000375254 APOL1O14791 398 aa7.04□□□□□ -1.28
UBR4-204ENST00000375254 P4HA1P13674 534 aa7.04□□□□□ -1.28
UBR4-204ENST00000375254 CCDC149Q6ZUS6 474 aa7.04□□□□□ -1.28
UBR4-204ENST00000375254 C16orf71Q8IYS4 520 aaPredicted RBP7.04□□□□□ -1.28
UBR4-204ENST00000375254 SUN2Q9UH99 717 aa7.04□□□□□ -1.28
UBR4-204ENST00000375254 PCP11498 1178 aaKnown RBP7.04□□□□□ -1.28
UBR4-204ENST00000375254 EFTUD2Q15029 972 aaKnown RBP eCLIP7.04□□□□□ -1.282e-6■■■□□ 17.2
UBR4-204ENST00000375254 ZBTB8BQ8NAP8 495 aaPredicted RBP7.04□□□□□ -1.28
UBR4-204ENST00000375254 TBCCD1Q9NVR7 557 aa7.04□□□□□ -1.28
UBR4-204ENST00000375254 HERC5Q9UII4 1024 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms