RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 RCOR1Q9UKL0 485 aa16.97■□□□□ 0.31
PFDN6-203ENST00000374610 GINS2Q9Y248 185 aa16.97■□□□□ 0.31
PFDN6-203ENST00000374610 WDR81Q562E7 1941 aa16.97■□□□□ 0.31
PFDN6-203ENST00000374610 E9PMD0 336 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 GAS2O43903 313 aaKnown RBP16.96■□□□□ 0.31
PFDN6-203ENST00000374610 USO1O60763 962 aaKnown RBP16.96■□□□□ 0.31
PFDN6-203ENST00000374610 MAFO75444 373 aaPredicted RBP16.96■□□□□ 0.31
PFDN6-203ENST00000374610 DGAT1O75907 488 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 STBD1O95210 358 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 RARRES1P49788 294 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 FPGSQ05932 587 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 PPIGQ13427 754 aaKnown RBP eCLIP16.96■□□□□ 0.312e-6■■□□□ 13.2
PFDN6-203ENST00000374610 KARSQ15046 597 aaKnown RBP16.96■□□□□ 0.31
PFDN6-203ENST00000374610 TARBP2Q15633 366 aaKnown RBP16.96■□□□□ 0.31
PFDN6-203ENST00000374610 ECM1Q16610 540 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 ZNF618Q5T7W0 954 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 MFSD5Q6N075 450 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 KCTD17Q8N5Z5 321 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 ZNF579Q8NAF0 562 aaKnown RBP16.96■□□□□ 0.31
PFDN6-203ENST00000374610 TCP11Q8WWU5 503 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 DHX38Q92620 1227 aaKnown RBP16.96■□□□□ 0.31
PFDN6-203ENST00000374610 SCLYQ96I15 445 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 CHAMP1Q96JM3 812 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 MMTAG2Q9BU76 263 aaKnown RBP16.96■□□□□ 0.31
PFDN6-203ENST00000374610 CCSER1Q9C0I3 900 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 PCDHA7Q9UN72 937 aa16.96■□□□□ 0.31
PFDN6-203ENST00000374610 UMODL1Q5DID0 1318 aa16.96■□□□□ 0.3
PFDN6-203ENST00000374610 PARNO95453 639 aaKnown RBP16.95■□□□□ 0.3
PFDN6-203ENST00000374610 EYA4O95677 639 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 IQCF3P0C7M6 154 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 MRPS6P82932 125 aaKnown RBP16.95■□□□□ 0.3
PFDN6-203ENST00000374610 GRB10Q13322 594 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 DHX8Q14562 1220 aaKnown RBP16.95■□□□□ 0.3
PFDN6-203ENST00000374610 EMC2Q15006 297 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 PADI6Q6TGC4 694 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 CCDC73Q6ZRK6 1079 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 MAEAQ7L5Y9 396 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 DEFB128Q7Z7B8 93 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 RPUSD2Q8IZ73 545 aaKnown RBP16.95■□□□□ 0.3
PFDN6-203ENST00000374610 WNT8BQ93098 351 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 CTAGE1Q96RT6 745 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 PPP1R16BQ96T49 567 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 PANK2Q9BZ23 570 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 GDPD2Q9HCC8 539 aa16.95■□□□□ 0.3
PFDN6-203ENST00000374610 SUCLA2Q9P2R7 463 aaPredicted RBP16.95■□□□□ 0.3
PFDN6-203ENST00000374610 VTNP04004 478 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 PLCG1P19174 1290 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 RFC2P35250 354 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 STAT6P42226 847 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 CDC42EP1Q00587 391 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 HYIQ5T013 277 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 FAM102BQ5T8I3 360 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 RHPN2Q8IUC4 686 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 KIAA0319LQ8IZA0 1049 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 PDILTQ8N807 584 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 MCPH1Q8NEM0 835 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 NLRP7Q8WX94 980 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 PSPC1Q8WXF1 523 aaKnown RBP16.94■□□□□ 0.3
PFDN6-203ENST00000374610 TMEM143Q96AN5 459 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 PNMA5Q96PV4 448 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 TRPV2Q9Y5S1 764 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 CDY2AQ9Y6F7 541 aa16.94■□□□□ 0.3
PFDN6-203ENST00000374610 TRIP12Q14669 1992 aaPredicted RBP16.94■□□□□ 0.3
PFDN6-203ENST00000374610 KRT18P05783 430 aaKnown RBP16.93■□□□□ 0.3
PFDN6-203ENST00000374610 PLA2G4BP0C869 781 aa16.93■□□□□ 0.3
PFDN6-203ENST00000374610 CSF2RAP15509 400 aa16.93■□□□□ 0.3
PFDN6-203ENST00000374610 ITGB8P26012 769 aa16.93■□□□□ 0.3
PFDN6-203ENST00000374610 MAGEA10P43363 369 aaPredicted RBP16.93■□□□□ 0.3
PFDN6-203ENST00000374610 TRIM71Q2Q1W2 868 aaKnown RBP16.93■□□□□ 0.3
PFDN6-203ENST00000374610 TMEM119Q4V9L6 283 aa16.93■□□□□ 0.3
PFDN6-203ENST00000374610 USP49Q70CQ1 688 aa16.93■□□□□ 0.3
PFDN6-203ENST00000374610 RPAINQ86UA6 219 aa16.93■□□□□ 0.3
PFDN6-203ENST00000374610 ZNF710Q8N1W2 664 aa16.93■□□□□ 0.3
PFDN6-203ENST00000374610 UBE2OQ9C0C9 1292 aaKnown RBP16.93■□□□□ 0.3
PFDN6-203ENST00000374610 WNT8AQ9H1J5 351 aa16.93■□□□□ 0.3
PFDN6-203ENST00000374610 DHX33Q9H6R0 707 aaKnown RBP16.93■□□□□ 0.3
PFDN6-203ENST00000374610 NLRP11P59045 1033 aaKnown RBP16.92■□□□□ 0.3
PFDN6-203ENST00000374610 RBL2Q08999 1139 aa16.92■□□□□ 0.3
PFDN6-203ENST00000374610 TFDP1Q14186 410 aa16.92■□□□□ 0.3
PFDN6-203ENST00000374610 KIZQ2M2Z5 673 aa16.92■□□□□ 0.3
PFDN6-203ENST00000374610 ADALQ6DHV7 355 aa16.92■□□□□ 0.3
PFDN6-203ENST00000374610 NLRP4Q96MN2 994 aa16.92■□□□□ 0.3
PFDN6-203ENST00000374610 PYM1Q9BRP8 204 aaKnown RBP16.92■□□□□ 0.3
PFDN6-203ENST00000374610 CELF4Q9BZC1 486 aaKnown RBP16.92■□□□□ 0.3
PFDN6-203ENST00000374610 PCDH10Q9P2E7 1040 aa16.92■□□□□ 0.3
PFDN6-203ENST00000374610 STK17AQ9UEE5 414 aa16.92■□□□□ 0.3
PFDN6-203ENST00000374610 IGKV6-21A0A0C4DH24 114 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 ASAP2O43150 1006 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 SRGAP2CP0DJJ0 459 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 ACTN1P12814 892 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 MXD4Q14582 209 aaPredicted RBP16.91■□□□□ 0.3
PFDN6-203ENST00000374610 ODR4Q5SWX8 454 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 SHC4Q6S5L8 630 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 SV2BQ7L1I2 683 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 SYT2Q8N9I0 419 aaPredicted RBP16.91■□□□□ 0.3
PFDN6-203ENST00000374610 IQUBQ8NA54 791 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 LARP4BQ92615 738 aaKnown RBP16.91■□□□□ 0.3
PFDN6-203ENST00000374610 RAD54LQ92698 747 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 ZNF668Q96K58 619 aaPredicted RBP16.91■□□□□ 0.3
PFDN6-203ENST00000374610 IFT74Q96LB3 600 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms