RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 C6orf222P0C671 652 aaPredicted RBP15.76■□□□□ 0.11
HMGA1-203ENST00000374116 RARBP10826 455 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 GCFC2P16383 781 aaKnown RBP15.76■□□□□ 0.11
HMGA1-203ENST00000374116 CYP3A7P24462 503 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 ITGB3BPQ13352 177 aaPredicted RBP15.76■□□□□ 0.11
HMGA1-203ENST00000374116 TCP11X2Q5H9J9 407 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 U2AF1L4Q8WU68 220 aaKnown RBP15.76■□□□□ 0.11
HMGA1-203ENST00000374116 GPRASP2Q96D09 838 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 CCDC51Q96ER9 411 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 MBOAT7Q96N66 472 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 AGO4Q9HCK5 861 aaKnown RBP15.76■□□□□ 0.11
HMGA1-203ENST00000374116 XPNPEP3Q9NQH7 507 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 GDAQ9Y2T3 454 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 FRMPD3Q5JV73 1810 aa15.76■□□□□ 0.11
HMGA1-203ENST00000374116 KCNJ18B7U540 433 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 MYO1CO00159 1063 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 KCNA2P16389 499 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 AMPD3Q01432 767 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 KCNJ12Q14500 433 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 HSDL1Q3SXM5 330 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 ARHGAP29Q52LW3 1261 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 TRIM65Q6PJ69 517 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 GIMAP8Q8ND71 665 aaPredicted RBP15.75■□□□□ 0.11
HMGA1-203ENST00000374116 OR6J1Q8NGC5 347 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 PPP1R13LQ8WUF5 828 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 HAS1Q92839 578 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 EXOC4Q96A65 974 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 C7orf25Q9BPX7 421 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 ZNF577Q9BSK1 485 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 RSPH14Q9UHP6 348 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 IPO5O00410 1097 aaKnown RBP15.75■□□□□ 0.11
HMGA1-203ENST00000374116 N4BP3O15049 544 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 TFRCP02786 760 aaKnown RBP15.75■□□□□ 0.11
HMGA1-203ENST00000374116 EN2P19622 333 aaPredicted RBP15.75■□□□□ 0.11
HMGA1-203ENST00000374116 ICAM3P32942 547 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 PPP1R2P41236 205 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 TXKP42681 527 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 COPB1P53618 953 aaKnown RBP15.75■□□□□ 0.11
HMGA1-203ENST00000374116 SOX10P56693 466 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 ARHGAP1Q07960 439 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 RBL2Q08999 1139 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 GRB10Q13322 594 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 TRIM14Q14142 442 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 CNGA4Q8IV77 575 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 DHX37Q8IY37 1157 aaKnown RBP15.75■□□□□ 0.11
HMGA1-203ENST00000374116 CALML4Q96GE6 196 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 PLIN2Q99541 437 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 TMEM106CQ9BVX2 250 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 MLXIPQ9HAP2 919 aa15.75■□□□□ 0.11
HMGA1-203ENST00000374116 PSMA7O14818 248 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 DUSP11O75319 330 aaKnown RBP15.74■□□□□ 0.11
HMGA1-203ENST00000374116 SGPL1O95470 568 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 TNNT3P45378 269 aaPredicted RBP15.74■□□□□ 0.11
HMGA1-203ENST00000374116 ZSCAN26Q16670 478 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 TMEM266Q2M3C6 531 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 Q4G0T1 1027 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 MOXD1Q6UVY6 613 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 NEK11Q8NG66 645 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 NOC3LQ8WTT2 800 aaKnown RBP15.74■□□□□ 0.11
HMGA1-203ENST00000374116 AFG1LQ8WV93 481 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 DHTKD1Q96HY7 919 aaPredicted RBP15.74■□□□□ 0.11
HMGA1-203ENST00000374116 PNMA5Q96PV4 448 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 NAP1L4Q99733 375 aaKnown RBP15.74■□□□□ 0.11
HMGA1-203ENST00000374116 TRIM9Q9C026 710 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 THAP9Q9H5L6 903 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 BLOC1S4Q9NUP1 217 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 DNAI1Q9UI46 699 aa15.74■□□□□ 0.11
HMGA1-203ENST00000374116 EFCAB8A8MWE9 144 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 CHMP2AO43633 222 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 MFAP3LO75121 409 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 TADA3O75528 432 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 FARP2O94887 1054 aaPredicted RBP15.73■□□□□ 0.11
HMGA1-203ENST00000374116 GJB1P08034 283 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 EEF1GP26641 437 aaKnown RBP15.73■□□□□ 0.11
HMGA1-203ENST00000374116 CCT6AP40227 531 aaKnown RBP15.73■□□□□ 0.11
HMGA1-203ENST00000374116 CELF3Q5SZQ8 465 aaKnown RBP15.73■□□□□ 0.11
HMGA1-203ENST00000374116 SRLQ86TD4 932 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 ETNPPLQ8TBG4 499 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 SPATA33Q96N06 139 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 RAB34Q9BZG1 259 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 KCNMB3Q9NPA1 279 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 LRWD1Q9UFC0 647 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 MAPK8IP1Q9UQF2 711 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 DHX15O43143 795 aaKnown RBP15.73■□□□□ 0.11
HMGA1-203ENST00000374116 ADAMTS4O75173 837 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 RPS6KA5O75582 802 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 GH1P01241 217 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 TGFB3P10600 412 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 CHMP4BP1P59074 171 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 SETQ01105 290 aaPredicted RBP15.73■□□□□ 0.11
HMGA1-203ENST00000374116 LRRC41Q15345 812 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 GNASQ5JWF2 1037 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 ICE2Q659A1 982 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 TOGARAM2Q6ZUX3 1019 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 DIS3LQ8TF46 1054 aaKnown RBP15.73■□□□□ 0.11
HMGA1-203ENST00000374116 UBXN4Q92575 508 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 AP5M1Q9H0R1 490 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 STK17AQ9UEE5 414 aa15.73■□□□□ 0.11
HMGA1-203ENST00000374116 MARCH6O60337 910 aa15.72■□□□□ 0.11
HMGA1-203ENST00000374116 CCDC175P0C221 793 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms