RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 TBKBP1A7MCY6 615 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 IGHA2P01877 340 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 A1BGP04217 495 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 RAD52P43351 418 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 RXRGP48443 463 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 PAPOLAP51003 745 aaKnown RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 DMPKQ09013 629 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 CCL15Q16663 113 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 CCDC57Q2TAC2 916 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 MZT2AQ6P582 158 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 ARHGAP22Q7Z5H3 698 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 DNAJB7Q7Z6W7 309 aaPredicted RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 YTHDF3Q7Z739 585 aaKnown RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 TBC1D1Q86TI0 1168 aaPredicted RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 NLRP10Q86W26 655 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 LRRC49Q8IUZ0 686 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 TRMT2AQ8IZ69 625 aaKnown RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 PPM1NQ8N819 430 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 SMYD1Q8NB12 490 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 SPATA5Q8NB90 893 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 IPMKQ8NFU5 416 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 GOT1L1Q8NHS2 421 aaPredicted RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 HNRNPLLQ8WVV9 542 aaKnown RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 APPBP2Q92624 585 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 ZKSCAN4Q969J2 545 aaPredicted RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 SH3GL1Q99961 368 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 TEX13BQ9BXU2 312 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 LRRCC1Q9C099 1032 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 PLCB1Q9NQ66 1216 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 ST7Q9NRC1 585 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 GTF2IRD1Q9UHL9 959 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 RIMKLBQ9ULI2 386 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 ANGEL1Q9UNK9 670 aaKnown RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 SSUH2Q9Y2M2 353 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 SLC30A1Q9Y6M5 507 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 RLFQ13129 1914 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 SYCE3A1L190 88 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 DCDC2CA8MYV0 355 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 ABLIM1O14639 778 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 SORBS3O60504 671 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 CD4P01730 458 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 PYGLP06737 847 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 TUBBP07437 444 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 IL1R1P14778 569 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 SLC8A1P32418 973 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 ETFBP38117 255 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 MAPK8P45983 427 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 SLC12A2P55011 1212 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 RPS8P62241 208 aaKnown RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 AP2B1P63010 937 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 SP140Q13342 867 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 DRP2Q13474 957 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 ELF2Q15723 593 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 IMMTQ16891 758 aaKnown RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 FAM110CQ1W6H9 321 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 RSPH3Q86UC2 560 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 TRIM22Q8IYM9 498 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 TEX9Q8N6V9 391 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 LINC00469Q8N7U9 141 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 B4GALNT2Q8NHY0 566 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 GTF3C6Q969F1 213 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 TCEANC2Q96MN5 208 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 TOX2Q96NM4 488 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 RBM14Q96PK6 669 aaKnown RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 GAS2L1Q99501 681 aaPredicted RBP5.55□□□□□ -1.52
UBE3D-202ENST00000369746 RNF208Q9H0X6 261 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 DISC1Q9NRI5 854 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 ANKIB1Q9P2G1 1089 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 GGA2Q9UJY4 613 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 SPO11Q9Y5K1 396 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 ZNF521Q96K83 1311 aa5.55□□□□□ -1.52
UBE3D-202ENST00000369746 M0QX08 132 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 MAP2K7O14733 419 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 KIAA0355O15063 1070 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TFRCP02786 760 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 PCP11498 1178 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 SCG2P13521 617 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 RPL13P26373 211 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 LMAN1P49257 510 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 FAPQ12884 760 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 ZBTB17Q13105 803 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 LAPTM5Q13571 262 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TMEM259Q4ZIN3 620 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 MCTP1Q6DN14 999 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 BTNL9Q6UXG8 535 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TAOK1Q7L7X3 1001 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 CCDC150Q8NCX0 1101 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 EPS8L1Q8TE68 723 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 COA7Q96BR5 231 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 ANKRD27Q96NW4 1050 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 NUDT12Q9BQG2 462 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 OSBPL10Q9BXB5 764 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 STARD7Q9NQZ5 370 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 RRN3Q9NYV6 651 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 POLLQ9UGP5 575 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 DDX25Q9UHL0 483 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 PNMA8BQ9ULN7 279 aaPredicted RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 CORO1CQ9ULV4 474 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms