RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 TLR9Q9NR96 1032 aa17.07■□□□□ 0.32
GDPD3-201ENST00000360688 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
GDPD3-201ENST00000360688 TYW1Q9NV66 732 aaKnown RBP17.07■□□□□ 0.32
GDPD3-201ENST00000360688 NAP1L2Q9ULW6 460 aaPredicted RBP17.07■□□□□ 0.32
GDPD3-201ENST00000360688 LOC730098B7Z3J9 87 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 PER2O15055 1255 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 GPR32O75388 356 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 FGF18O76093 207 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
GDPD3-201ENST00000360688 FGFR1P11362 822 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 CPA1P15085 419 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 METAP2P50579 478 aaKnown RBP eCLIP17.06■□□□□ 0.32
GDPD3-201ENST00000360688 ERVFC1P60507 584 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 FAM189BP81408 668 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 SETQ01105 290 aaPredicted RBP17.06■□□□□ 0.32
GDPD3-201ENST00000360688 DSC3Q14574 896 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 TRMT1LQ7Z2T5 733 aaKnown RBP17.06■□□□□ 0.32
GDPD3-201ENST00000360688 METTL13Q8N6R0 699 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 COLGALT1Q8NBJ5 622 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 MFSD14AQ96MC6 490 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 CWH43Q9H720 699 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 TMEM161AQ9NX61 479 aa17.06■□□□□ 0.32
GDPD3-201ENST00000360688 USP15Q9Y4E8 981 aaPredicted RBP17.06■□□□□ 0.32
GDPD3-201ENST00000360688 CCDC196A0A1B0GTZ2 297 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 FGD1P98174 961 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 RBM10P98175 930 aaKnown RBP17.05■□□□□ 0.32
GDPD3-201ENST00000360688 NHLH1Q02575 133 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 APOBRQ0VD83 1088 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 PKN1Q16512 942 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 DUSP6Q16828 381 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 MCTP2Q6DN12 878 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 SMAP1Q8IYB5 467 aaPredicted RBP17.05■□□□□ 0.32
GDPD3-201ENST00000360688 THNSL1Q8IYQ7 743 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 REXO1Q8N1G1 1221 aaKnown RBP17.05■□□□□ 0.32
GDPD3-201ENST00000360688 VN1R2Q8NFZ6 395 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 ELAC1Q9H777 363 aaKnown RBP17.05■□□□□ 0.32
GDPD3-201ENST00000360688 ATP6V0A4Q9HBG4 840 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 C6orf50Q9HD87 102 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 PCDHA10Q9Y5I2 948 aa17.05■□□□□ 0.32
GDPD3-201ENST00000360688 FSCN2O14926 492 aa17.04■□□□□ 0.32
GDPD3-201ENST00000360688 PSAPP07602 524 aa17.04■□□□□ 0.32
GDPD3-201ENST00000360688 CLCN3P51790 818 aa17.04■□□□□ 0.32
GDPD3-201ENST00000360688 CBX2Q14781 532 aaPredicted RBP17.04■□□□□ 0.32
GDPD3-201ENST00000360688 PRR16Q569H4 304 aa17.04■□□□□ 0.32
GDPD3-201ENST00000360688 CCDC12Q8WUD4 166 aaPredicted RBP17.04■□□□□ 0.32
GDPD3-201ENST00000360688 CDCA3Q99618 268 aaPredicted RBP17.04■□□□□ 0.32
GDPD3-201ENST00000360688 PHF7Q9BWX1 381 aaPredicted RBP17.04■□□□□ 0.32
GDPD3-201ENST00000360688 GABBR1Q9UBS5 961 aa17.04■□□□□ 0.32
GDPD3-201ENST00000360688 ZDBF2Q9HCK1 2354 aa17.04■□□□□ 0.32
GDPD3-201ENST00000360688 MAGEB2O15479 319 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
GDPD3-201ENST00000360688 LAG3P18627 525 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 CIITAP33076 1130 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 MRE11P49959 708 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 NLRP11P59045 1033 aaKnown RBP17.03■□□□□ 0.32
GDPD3-201ENST00000360688 PDE12Q6L8Q7 609 aaKnown RBP17.03■□□□□ 0.32
GDPD3-201ENST00000360688 Q6ZUG5 572 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 BMP8AQ7Z5Y6 402 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 LINC01465Q8N7H1 131 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 RASGRP4Q8TDF6 673 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 BRF1Q92994 677 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 LENG9Q96B70 501 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 CASD1Q96PB1 797 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 TMEM117Q9H0C3 514 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 RNF19AQ9NV58 838 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 TCEAL9Q9UHQ7 104 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 CEP131Q9UPN4 1083 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 LZTS1Q9Y250 596 aa17.03■□□□□ 0.32
GDPD3-201ENST00000360688 NID2Q14112 1375 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 FSD2A1L4K1 749 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 CDC45O75419 566 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 GNA11P29992 359 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 EFCAB12Q6NXP0 572 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 LRRC55Q6ZSA7 311 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 TRIM67Q6ZTA4 783 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 SUSD6Q92537 303 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 MRPS27Q92552 414 aaKnown RBP17.02■□□□□ 0.32
GDPD3-201ENST00000360688 KCNB2Q92953 911 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 PHKBQ93100 1093 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 FAM167AQ96KS9 214 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 ADAMTS10Q9H324 1103 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 AKT3Q9Y243 479 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 SAMM50Q9Y512 469 aa17.02■□□□□ 0.32
GDPD3-201ENST00000360688 TMEM221A6NGB7 291 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 WDR64B1ANS9 1081 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 M0R296 226 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 ZNF862O60290 1169 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 CENPBP07199 599 aaPredicted RBP17.01■□□□□ 0.31
GDPD3-201ENST00000360688 ATF7P17544 494 aaPredicted RBP17.01■□□□□ 0.31
GDPD3-201ENST00000360688 EIF4BP23588 611 aaKnown RBP17.01■□□□□ 0.31
GDPD3-201ENST00000360688 ZXDAP98168 799 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 PLCB3Q01970 1234 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 KCNC3Q14003 757 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 PLPP4Q5VZY2 271 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 TMEM184AQ6ZMB5 413 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 LRRC71Q8N4P6 559 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 RPGRIP1Q96KN7 1286 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 JAKMIP1Q96N16 626 aaKnown RBP17.01■□□□□ 0.31
GDPD3-201ENST00000360688 MAP7D2Q96T17 732 aa17.01■□□□□ 0.31
GDPD3-201ENST00000360688 DISC1Q9NRI5 854 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms