RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 MRPL47Q9HD33 250 aaKnown RBP17.62■□□□□ 0.41
SCAF1-201ENST00000360565 MIF4GDA9UHW6 222 aaKnown RBP17.62■□□□□ 0.41
SCAF1-201ENST00000360565 EYA4O95677 639 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 LMNB2Q03252 620 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 CDC42EP5Q6NZY7 148 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 CRAMP1Q96RY5 1269 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 CNOT8Q9UFF9 292 aaKnown RBP17.62■□□□□ 0.41
SCAF1-201ENST00000360565 ANAPC7Q9UJX3 599 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 MST1RQ04912 1400 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 PSMD14O00487 310 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 GPC5P78333 572 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 CEP55Q53EZ4 464 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 GJD4Q96KN9 370 aaPredicted RBP17.62■□□□□ 0.41
SCAF1-201ENST00000360565 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.62■□□□□ 0.411e-7■■□□□ 13.5
SCAF1-201ENST00000360565 FTLP02792 175 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-201ENST00000360565 CCND2P30279 289 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 FAM160B1Q5W0V3 765 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 ERGIC2Q96RQ1 377 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 REEP2Q9BRK0 252 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 PLEKP08567 350 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-201ENST00000360565 CDKAL1Q5VV42 579 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 MIS18BP1Q6P0N0 1132 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 ADPGKQ9BRR6 497 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 TAF1DQ9H5J8 278 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-201ENST00000360565 AMACRQ9UHK6 382 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 P4HBP07237 508 aaKnown RBP17.61■□□□□ 0.41
SCAF1-201ENST00000360565 UCHL3P15374 230 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 H2AFXP16104 143 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-201ENST00000360565 QARSP47897 775 aaKnown RBP17.61■□□□□ 0.41
SCAF1-201ENST00000360565 VAMP7P51809 220 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 DNAJC24Q6P3W2 148 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 C3orf67Q6ZVT6 689 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 RPUSD2Q8IZ73 545 aaKnown RBP17.61■□□□□ 0.41
SCAF1-201ENST00000360565 VGLL2Q8N8G2 317 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 INTS2Q9H0H0 1204 aaKnown RBP17.61■□□□□ 0.41
SCAF1-201ENST00000360565 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-201ENST00000360565 SLC9A1P19634 815 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 OSTNP61366 133 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 DYNLT1P63172 113 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 CCNI2Q6ZMN8 369 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-201ENST00000360565 KBTBD4Q9NVX7 518 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 HESX1Q9UBX0 185 aa17.61■□□□□ 0.41
SCAF1-201ENST00000360565 NOC2LQ9Y3T9 749 aaKnown RBP17.61■□□□□ 0.41
SCAF1-201ENST00000360565 ESYT2A0FGR8 921 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 H7C0C1 242 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 SLC37A4O43826 429 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 PSAPP07602 524 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 CYP2C19P33261 490 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 ATP5OP48047 213 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 CIAPIN1Q6FI81 312 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 TCP11Q8WWU5 503 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 FAM81BQ96LP2 452 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 CNOT10Q9H9A5 744 aaKnown RBP17.6■□□□□ 0.41
SCAF1-201ENST00000360565 LRRD1A4D1F6 860 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 WDR64B1ANS9 1081 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 CIB2O75838 187 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 TTI2Q6NXR4 508 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 ZBTB33Q86T24 672 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 PLAGL2Q9UPG8 496 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 SYNGAP1Q96PV0 1343 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 GRID2IPA4D2P6 1211 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 SMIM22K7EJ46 135 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 KRT1P04264 644 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 RASSF2P50749 326 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 FXR2P51116 673 aaKnown RBP eCLIP17.6■□□□□ 0.412e-7■■■□□ 16.6
SCAF1-201ENST00000360565 LRRC8CQ8TDW0 803 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 RILPQ96NA2 401 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.6■□□□□ 0.41
SCAF1-201ENST00000360565 DUSP10Q9Y6W6 482 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 EMSYQ7Z589 1322 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 CNTNAP4Q9C0A0 1308 aa17.6■□□□□ 0.41
SCAF1-201ENST00000360565 YWHAGP61981 247 aaKnown RBP eCLIP17.59■□□□□ 0.41
SCAF1-201ENST00000360565 DAGLBQ8NCG7 672 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 PROCA1Q8NCQ7 364 aaPredicted RBP17.59■□□□□ 0.41
SCAF1-201ENST00000360565 PPP1R12CQ9BZL4 782 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 TTLL3Q9Y4R7 772 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 DENND3A2RUS2 1198 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 PODXLO00592 558 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 SARSP49591 514 aaKnown RBP17.59■□□□□ 0.41
SCAF1-201ENST00000360565 IL9RQ01113 521 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 SLC10A5Q5PT55 438 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 SPATA31A5Q5VU36 1347 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 SPATA31A7Q8IWB4 1347 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 RFFLQ8WZ73 363 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 SAAL1Q96ER3 474 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 HEMGNQ9BXL5 484 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 TBC1D22BQ9NU19 505 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 SMARCA1P28370 1054 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 LDHDQ86WU2 507 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 RTKN2Q8IZC4 609 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 PNKPQ96T60 521 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 LACRTQ9GZZ8 138 aa17.59■□□□□ 0.41
SCAF1-201ENST00000360565 A0A087X0B3 334 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 WTIPA6NIX2 430 aaPredicted RBP17.58■□□□□ 0.41
SCAF1-201ENST00000360565 SOX5P35711 763 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 MAGOHP61326 146 aaKnown RBP17.58■□□□□ 0.41
SCAF1-201ENST00000360565 TMED2Q15363 201 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 VPS72Q15906 364 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 ZNF394Q53GI3 561 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 SLC27A3Q5K4L6 730 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms