RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 TIPINQ9BVW5 301 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 ATP6V0A4Q9HBG4 840 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 PARVGQ9HBI0 331 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 C6orf222P0C671 652 aaPredicted RBP24.23■■□□□ 1.47
HOXA4-201ENST00000360046 BEX3Q00994 111 aa24.23■■□□□ 1.47
HOXA4-201ENST00000360046 STIM1Q13586 685 aa24.23■■□□□ 1.47
HOXA4-201ENST00000360046 FAM102BQ5T8I3 360 aa24.23■■□□□ 1.47
HOXA4-201ENST00000360046 CTU1Q7Z7A3 348 aaKnown RBP24.23■■□□□ 1.47
HOXA4-201ENST00000360046 KIAA0895Q8NCT3 520 aa24.23■■□□□ 1.47
HOXA4-201ENST00000360046 BPIFA3Q9BQP9 254 aa24.23■■□□□ 1.47
HOXA4-201ENST00000360046 SPC25Q9HBM1 224 aa24.23■■□□□ 1.47
HOXA4-201ENST00000360046 HMX1Q9NP08 348 aaPredicted RBP24.23■■□□□ 1.47
HOXA4-201ENST00000360046 PPP1R3GB7ZBB8 358 aa24.22■■□□□ 1.47
HOXA4-201ENST00000360046 H3BRB1 525 aa24.22■■□□□ 1.47
HOXA4-201ENST00000360046 MYCNP04198 464 aaPredicted RBP24.22■■□□□ 1.47
HOXA4-201ENST00000360046 PRCPP42785 496 aa24.22■■□□□ 1.47
HOXA4-201ENST00000360046 FSCN1Q16658 493 aaKnown RBP24.22■■□□□ 1.47
HOXA4-201ENST00000360046 AOPEPQ8N6M6 819 aa24.22■■□□□ 1.47
HOXA4-201ENST00000360046 DRC1Q96MC2 740 aa24.22■■□□□ 1.47
HOXA4-201ENST00000360046 RNPEPQ9H4A4 650 aa24.22■■□□□ 1.47
HOXA4-201ENST00000360046 TUT1Q9H6E5 874 aaKnown RBP24.22■■□□□ 1.47
HOXA4-201ENST00000360046 GRPEL1Q9HAV7 217 aa24.22■■□□□ 1.47
HOXA4-201ENST00000360046 SYNRGQ9UMZ2 1314 aa24.22■■□□□ 1.47
HOXA4-201ENST00000360046 BECN2A8MW95 431 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 HBP1O60381 514 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 PGK1P00558 417 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 MAPK7Q13164 816 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 EMC2Q15006 297 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 TARBP2Q15633 366 aaKnown RBP24.21■■□□□ 1.47
HOXA4-201ENST00000360046 SLC9C1Q4G0N8 1177 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 DAW1Q8N136 415 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 MCPH1Q8NEM0 835 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 SLC7A3Q8WY07 619 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 GPRC5CQ9NQ84 441 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 XPNPEP3Q9NQH7 507 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 DDX20Q9UHI6 824 aaKnown RBP24.21■■□□□ 1.47
HOXA4-201ENST00000360046 CTNND2Q9UQB3 1225 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 MYCP01106 439 aaPredicted RBP24.21■■□□□ 1.47
HOXA4-201ENST00000360046 MYL3P08590 195 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 RFC5P40937 340 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 ZNF131P52739 623 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 IQCB1Q15051 598 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 ODR4Q5SWX8 454 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 L1TD1Q5T7N2 865 aaKnown RBP24.21■■□□□ 1.47
HOXA4-201ENST00000360046 ADSSL1Q8N142 457 aa24.21■■□□□ 1.47
HOXA4-201ENST00000360046 MRPL44Q9H9J2 332 aaKnown RBP24.21■■□□□ 1.47
HOXA4-201ENST00000360046 GJA9P57773 515 aa24.2■■□□□ 1.46
HOXA4-201ENST00000360046 CHMP4BP1P59074 171 aa24.2■■□□□ 1.46
HOXA4-201ENST00000360046 TBC1D8BQ0IIM8 1120 aa24.2■■□□□ 1.46
HOXA4-201ENST00000360046 LRRC41Q15345 812 aa24.2■■□□□ 1.46
HOXA4-201ENST00000360046 DHX40Q8IX18 779 aaKnown RBP24.2■■□□□ 1.46
HOXA4-201ENST00000360046 GLIS3Q8NEA6 775 aa24.2■■□□□ 1.46
HOXA4-201ENST00000360046 FGFBP2Q9BYJ0 223 aa24.2■■□□□ 1.46
HOXA4-201ENST00000360046 PPME1Q9Y570 386 aa24.2■■□□□ 1.46
HOXA4-201ENST00000360046 PCDHA2Q9Y5H9 948 aa24.2■■□□□ 1.46
HOXA4-201ENST00000360046 GOLGA6L19H0YKK7 550 aa24.19■■□□□ 1.46
HOXA4-201ENST00000360046 PSMA7O14818 248 aa24.19■■□□□ 1.46
HOXA4-201ENST00000360046 ERCC5P28715 1186 aaPredicted RBP24.19■■□□□ 1.46
HOXA4-201ENST00000360046 SOX10P56693 466 aa24.19■■□□□ 1.46
HOXA4-201ENST00000360046 CT47A1Q5JQC4 288 aaPredicted RBP24.19■■□□□ 1.46
HOXA4-201ENST00000360046 GNASQ5JWF2 1037 aa24.19■■□□□ 1.46
HOXA4-201ENST00000360046 KIFAP3Q92845 792 aa24.19■■□□□ 1.46
HOXA4-201ENST00000360046 CEP89Q96ST8 783 aa24.19■■□□□ 1.46
HOXA4-201ENST00000360046 DHX33Q9H6R0 707 aaKnown RBP24.19■■□□□ 1.46
HOXA4-201ENST00000360046 XPNPEP1Q9NQW7 623 aa24.19■■□□□ 1.46
HOXA4-201ENST00000360046 OLFML3Q9NRN5 406 aa24.19■■□□□ 1.46
HOXA4-201ENST00000360046 LARSQ9P2J5 1176 aaKnown RBP24.19■■□□□ 1.46
HOXA4-201ENST00000360046 SEL1LQ9UBV2 794 aa24.19■■□□□ 1.46
HOXA4-201ENST00000360046 MYADML2A6NDP7 307 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 DEKP35659 375 aaKnown RBP24.18■■□□□ 1.46
HOXA4-201ENST00000360046 STX17P56962 302 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 IGBP1P78318 339 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 PAK1Q13153 545 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 FAM178BQ8IXR5 827 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 TRAPPC12Q8WVT3 735 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 NELFBQ8WX92 580 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 PDLIM7Q9NR12 457 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 ZBTB42B2RXF5 422 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 F2P00734 622 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 PLS3P13797 630 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 INSRRP14616 1297 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 PPP1R2P41236 205 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 MRE11P49959 708 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 MYL5Q02045 173 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 MYOCDQ8IZQ8 938 aa24.18■■□□□ 1.46
HOXA4-201ENST00000360046 UPF3AQ9H1J1 476 aaKnown RBP24.18■■□□□ 1.46
HOXA4-201ENST00000360046 SMTNL1A8MU46 457 aa24.17■■□□□ 1.46
HOXA4-201ENST00000360046 MAFO75444 373 aaPredicted RBP24.17■■□□□ 1.46
HOXA4-201ENST00000360046 GCNT3O95395 438 aa24.17■■□□□ 1.46
HOXA4-201ENST00000360046 COBLL1Q53SF7 1204 aa24.17■■□□□ 1.46
HOXA4-201ENST00000360046 ZNF484Q5JVG2 852 aa24.17■■□□□ 1.46
HOXA4-201ENST00000360046 TMEM143Q96AN5 459 aa24.17■■□□□ 1.46
HOXA4-201ENST00000360046 POLR3FQ9H1D9 316 aaPredicted RBP24.17■■□□□ 1.46
HOXA4-201ENST00000360046 KAT6AQ92794 2004 aa24.17■■□□□ 1.46
HOXA4-201ENST00000360046 MSCO60682 206 aa24.16■■□□□ 1.46
HOXA4-201ENST00000360046 NMT1P30419 496 aaKnown RBP24.16■■□□□ 1.46
HOXA4-201ENST00000360046 CASP5P51878 434 aa24.16■■□□□ 1.46
HOXA4-201ENST00000360046 KIAA0753Q2KHM9 967 aa24.16■■□□□ 1.46
HOXA4-201ENST00000360046 EXOC8Q8IYI6 725 aa24.16■■□□□ 1.46
HOXA4-201ENST00000360046 GUF1Q8N442 669 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms