RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ANKRD36BP1Q96IX9 119 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 DDX28Q9NUL7 540 aaKnown RBP13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 CCDC87Q9NVE4 849 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 ZSWIM5Q9P217 1185 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 PDP2Q9P2J9 529 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 DNAJC12Q9UKB3 198 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 SMG5Q9UPR3 1016 aaKnown RBP13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 PVALEFA0A1B0GWK0 134 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 LRRIQ4A6NIV6 560 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 ZNF229Q9UJW7 825 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 PARP3Q9Y6F1 533 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 MAP3K7CLP57077 242 aa13.58□□□□□ -0.23
SYNCRIP-201ENST00000355238 FLOT2Q14254 428 aa13.58□□□□□ -0.23
SYNCRIP-201ENST00000355238 FAM83BQ5T0W9 1011 aa13.58□□□□□ -0.23
SYNCRIP-201ENST00000355238 OSBP2Q969R2 916 aa13.58□□□□□ -0.23
SYNCRIP-201ENST00000355238 WNT8AQ9H1J5 351 aa13.58□□□□□ -0.23
SYNCRIP-201ENST00000355238 ITIH6Q6UXX5 1313 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 TRIM49BA6NDI0 452 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 ADORA1P30542 326 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 PHKA1P46020 1223 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 JDP2Q8WYK2 163 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 STRIP2Q9ULQ0 834 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 AATKQ6ZMQ8 1374 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 E2F6O75461 281 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 COPS2P61201 443 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 PODNQ7Z5L7 613 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 ANAPC7Q9UJX3 599 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 WDR64B1ANS9 1081 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 H3BRJ5 948 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 TOM1O60784 492 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 NYAP1Q6ZVC0 841 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 TRIM59Q8IWR1 403 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 BBS5Q8N3I7 341 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 TMCO5AQ8N6Q1 288 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 KITP10721 976 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 TRAPPC3LQ5T215 181 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 CCDC137Q6PK04 289 aaKnown RBP13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 ATP11CQ8NB49 1132 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 NOD2Q9HC29 1040 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 PFASO15067 1338 aa13.58□□□□□ -0.24
SYNCRIP-201ENST00000355238 SERPINB3P29508 390 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 RPS8P62241 208 aaKnown RBP13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 SLC12A1Q13621 1099 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 ZNF710Q8N1W2 664 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 SLC38A10Q9HBR0 1119 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 KMT5AQ9NQR1 393 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 TSC22D4Q9Y3Q8 395 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 ABCC10Q5T3U5 1492 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 SPDYE16A6NNV3 312 aaPredicted RBP13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 ERVV-2B6SEH9 535 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 KCNQ3O43525 872 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 SLC44A4Q53GD3 710 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 SEPT8Q92599 483 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 ZBTB18Q99592 522 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 PCIF1Q9H4Z3 704 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 CNOT8Q9UFF9 292 aaKnown RBP13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 KRT8P05787 483 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 SLFN13Q68D06 897 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 PDXDC1Q6P996 788 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 CYB5D1Q6P9G0 228 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 DNAJC10Q8IXB1 793 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 CABLES1Q8TDN4 633 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 VPS39Q96JC1 886 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 NRBP2Q9NSY0 501 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 A0A1B0GTH6 734 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 ECM2O94769 699 aaPredicted RBP13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 ACADSP16219 412 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 GYG1P46976 350 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 MTF1Q14872 753 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 EFTUD2Q15029 972 aaKnown RBP eCLIP13.57□□□□□ -0.242e-8■■■■□ 19.5
SYNCRIP-201ENST00000355238 PTGISQ16647 500 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 CNPY4Q8N129 248 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 ATP6V0A1Q93050 837 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 FAM8A1Q9UBU6 413 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 TCP10Q12799 353 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 MAPRE2Q15555 327 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 ADA2Q9NZK5 511 aa13.57□□□□□ -0.24
SYNCRIP-201ENST00000355238 GNPATO15228 680 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 ATP2B4P23634 1241 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 MARK3P27448 753 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 SYDE1Q6ZW31 735 aaPredicted RBP13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 ZNF577Q9BSK1 485 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 SUCLA2Q9P2R7 463 aaPredicted RBP13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 RPAP1Q9BWH6 1393 aaPredicted RBP13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 KRT75O95678 551 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 PAWRQ96IZ0 340 aaKnown RBP13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 CCDC90BQ9GZT6 254 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 LIMA1Q9UHB6 759 aaKnown RBP13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 TFDP2Q14188 446 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 OLFML2BQ68BL8 750 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 PUS7LQ9H0K6 701 aaKnown RBP13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 CYP4F11Q9HBI6 524 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 CCPG1Q9ULG6 757 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 DDIT3P35638 169 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 RCAN1P53805 252 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms