RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PRPF4BQ13523 1007 aaKnown RBP21.33■■□□□ 1.01
COL13A1-201ENST00000354547 KRT27Q7Z3Y8 459 aa21.33■■□□□ 1.01
COL13A1-201ENST00000354547 OR2W6PQ8NHA6 318 aa21.33■■□□□ 1.01
COL13A1-201ENST00000354547 RUBCNQ92622 972 aa21.33■■□□□ 1.01
COL13A1-201ENST00000354547 SH2D3AQ9BRG2 576 aa21.33■■□□□ 1.01
COL13A1-201ENST00000354547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.33■■□□□ 1.01
COL13A1-201ENST00000354547 BZW2Q9Y6E2 419 aaKnown RBP21.33■■□□□ 1.01
COL13A1-201ENST00000354547 GAS7O60861 476 aa21.33■■□□□ 1
COL13A1-201ENST00000354547 STAT2P52630 851 aa21.33■■□□□ 1
COL13A1-201ENST00000354547 TBC1D10BQ4KMP7 808 aaPredicted RBP21.33■■□□□ 1
COL13A1-201ENST00000354547 OTOP1Q7RTM1 612 aa21.33■■□□□ 1
COL13A1-201ENST00000354547 GMCL1P1Q8NEA9 526 aa21.33■■□□□ 1
COL13A1-201ENST00000354547 WRAP73Q9P2S5 460 aaPredicted RBP21.33■■□□□ 1
COL13A1-201ENST00000354547 IGLV3-22A0A075B6J6 115 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 KRIT1O00522 736 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 ONECUT3O60422 494 aaPredicted RBP21.32■■□□□ 1
COL13A1-201ENST00000354547 TRIM31Q9BZY9 425 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 NOC2LQ9Y3T9 749 aaKnown RBP21.32■■□□□ 1
COL13A1-201ENST00000354547 VGLL3A8MV65 326 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 LRRN2O75325 713 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 GALCP54803 685 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 ODR4Q5SWX8 454 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 FAM178BQ8IXR5 827 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 LRRC57Q8N9N7 239 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 BANK1Q8NDB2 785 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 HSD17B14Q9BPX1 270 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 POLR3CQ9BUI4 534 aaPredicted RBP21.32■■□□□ 1
COL13A1-201ENST00000354547 PARVGQ9HBI0 331 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 AMACRQ9UHK6 382 aa21.32■■□□□ 1
COL13A1-201ENST00000354547 SHOX2O60902 331 aaPredicted RBP21.31■■□□□ 1
COL13A1-201ENST00000354547 HPDP32754 393 aaPredicted RBP21.31■■□□□ 1
COL13A1-201ENST00000354547 PSMC2P35998 433 aaKnown RBP21.31■■□□□ 1
COL13A1-201ENST00000354547 STAT1P42224 750 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 GUCY1A3Q02108 690 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 CEP85LQ5SZL2 805 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 IQCKQ8N0W5 287 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 DNAJC12Q9UKB3 198 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 SART1O43290 800 aaKnown RBP21.31■■□□□ 1
COL13A1-201ENST00000354547 TNFRSF8P28908 595 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 CIITAP33076 1130 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 DRAP1Q14919 205 aaPredicted RBP21.31■■□□□ 1
COL13A1-201ENST00000354547 IFI16Q16666 785 aaKnown RBP21.31■■□□□ 1
COL13A1-201ENST00000354547 CBWD6Q4V339 395 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 CBWD3Q5JTY5 395 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 CBWD5Q5RIA9 395 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 SYCP3Q8IZU3 236 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 PIK3R5Q8WYR1 880 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 PLAAQ9Y263 795 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 ANKRD31Q8N7Z5 1873 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 PPP1R12BO60237 982 aaPredicted RBP21.31■■□□□ 1
COL13A1-201ENST00000354547 ARP10275 920 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 CELF4Q9BZC1 486 aaKnown RBP21.31■■□□□ 1
COL13A1-201ENST00000354547 PCIF1Q9H4Z3 704 aa21.31■■□□□ 1
COL13A1-201ENST00000354547 ZMYM2Q9UBW7 1377 aa21.3■■□□□ 1
COL13A1-201ENST00000354547 LRRC37AA6NMS7 1700 aa21.3■■□□□ 1
COL13A1-201ENST00000354547 COPB2P35606 906 aa21.3■■□□□ 1
COL13A1-201ENST00000354547 C10orf76Q5T2E6 689 aa21.3■■□□□ 1
COL13A1-201ENST00000354547 C1orf186Q6ZWK4 172 aa21.3■■□□□ 1
COL13A1-201ENST00000354547 LNX1Q8TBB1 728 aaPredicted RBP21.3■■□□□ 1
COL13A1-201ENST00000354547 FBXO28Q9NVF7 368 aa21.3■■□□□ 1
COL13A1-201ENST00000354547 ZBTB21Q9ULJ3 1066 aa21.3■■□□□ 1
COL13A1-201ENST00000354547 PGRMC1O00264 195 aaKnown RBP21.3■■□□□ 1
COL13A1-201ENST00000354547 EIF3HO15372 352 aaKnown RBP eCLIP21.3■■□□□ 1
COL13A1-201ENST00000354547 JAM2P57087 298 aa21.3■■□□□ 1
COL13A1-201ENST00000354547 MIGA2Q7L4E1 593 aa21.3■■□□□ 1
COL13A1-201ENST00000354547 TAF1DQ9H5J8 278 aaPredicted RBP21.3■■□□□ 1
COL13A1-201ENST00000354547 BCCIPQ9P287 314 aaKnown RBP eCLIP21.3■■□□□ 1
COL13A1-201ENST00000354547 SCAF8Q9UPN6 1271 aaKnown RBP21.3■■□□□ 1
COL13A1-201ENST00000354547 GREB1LQ9C091 1923 aaPredicted RBP21.3■■□□□ 1
COL13A1-201ENST00000354547 GRIN2DO15399 1336 aa21.3■■□□□ 1
COL13A1-201ENST00000354547 SHTN1A0MZ66 631 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 TISP43B9A030 160 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 GCOM1H8Y6P7 765 aaPredicted RBP21.29■■□□□ 1
COL13A1-201ENST00000354547 POLR2MP0CAP2 368 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 FMO5P49326 533 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 HS2ST1Q7LGA3 356 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 HOOK2Q96ED9 719 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 RNPC3Q96LT9 517 aaKnown RBP21.29■■□□□ 1
COL13A1-201ENST00000354547 ZNF577Q9BSK1 485 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 DPH5Q9H2P9 285 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 CHORDC1Q9UHD1 332 aaPredicted RBP21.29■■□□□ 1
COL13A1-201ENST00000354547 SCN9AQ15858 1988 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 BMT2Q1RMZ1 405 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 FAM107BQ9H098 131 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 TSPYL1Q9H0U9 437 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 NEUROG2Q9H2A3 272 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 SIPA1L1O43166 1804 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 SLC16A3O15427 465 aaKnown RBP21.29■■□□□ 1
COL13A1-201ENST00000354547 SLC26A4O43511 780 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 EXOC3O60645 756 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 GAP43P17677 238 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 PRKCIP41743 596 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 CDAN1Q8IWY9 1227 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 PBKQ96KB5 322 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 OLFML3Q9NRN5 406 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 SERPINA10Q9UK55 444 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 FRMD4BQ9Y2L6 1034 aa21.29■■□□□ 1
COL13A1-201ENST00000354547 EBAG9O00559 213 aa21.28■■□□□ 1
COL13A1-201ENST00000354547 DAPK3O43293 454 aa21.28■■□□□ 1
COL13A1-201ENST00000354547 PSMD10O75832 226 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms