RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 IFIH1Q9BYX4 1025 aaKnown RBP15.44■□□□□ 0.06
TPM4-202ENST00000344824 TMEM60Q9H2L4 133 aa15.44■□□□□ 0.06
TPM4-202ENST00000344824 SEMA6BQ9H3T3 888 aa15.44■□□□□ 0.06
TPM4-202ENST00000344824 ZNF576Q9H609 170 aa15.44■□□□□ 0.06
TPM4-202ENST00000344824 SLC28A3Q9HAS3 691 aa15.44■□□□□ 0.06
TPM4-202ENST00000344824 KCNMB3Q9NPA1 279 aa15.44■□□□□ 0.06
TPM4-202ENST00000344824 LMBRD1Q9NUN5 540 aa15.44■□□□□ 0.06
TPM4-202ENST00000344824 PCDHA2Q9Y5H9 948 aa15.44■□□□□ 0.06
TPM4-202ENST00000344824 COL4A4P53420 1690 aaPredicted RBP15.44■□□□□ 0.06
TPM4-202ENST00000344824 GOLGA6L4A6NEF3 574 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 ZNF862O60290 1169 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 BMP15O95972 392 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 IBSPP21815 317 aaPredicted RBP15.43■□□□□ 0.06
TPM4-202ENST00000344824 MGAT3Q09327 533 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 MTERF2Q49AM1 385 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 PLEKHG4Q58EX7 1191 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 IER5Q5VY09 327 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 HERC6Q8IVU3 1022 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 RDM1Q8NG50 284 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 MYLIPQ8WY64 445 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 FAM20AQ96MK3 541 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 GUCD1Q96NT3 240 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 SH2D3AQ9BRG2 576 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 NRBP2Q9NSY0 501 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 VAV3Q9UKW4 847 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 PCDHA7Q9UN72 937 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 TMEM265A0A087WTH1 108 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 SMIM35A0A1B0GVV1 85 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 ABHD14A-ACY1A0A1B0GW23 586 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 TMEM150BA6NC51 233 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 EML1O00423 815 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 TBX3O15119 743 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 TLL1O43897 1013 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 EFCAB14O75071 495 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 C22orf31O95567 290 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 AMHP03971 560 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 RPLP2P05387 115 aaKnown RBP15.43■□□□□ 0.06
TPM4-202ENST00000344824 CA3P07451 260 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 CLCN3P51790 818 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 ATP2C1P98194 919 aaPredicted RBP15.43■□□□□ 0.06
TPM4-202ENST00000344824 LPIN1Q14693 890 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 FAM26DQ5JW98 314 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.43■□□□□ 0.066e-8■□□□□ 9.1
TPM4-202ENST00000344824 SLFN12Q8IYM2 578 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 LRRC71Q8N4P6 559 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 HAS1Q92839 578 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 CLIC6Q96NY7 704 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 AKT3Q9Y243 479 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 PCDHA11Q9Y5I1 949 aa15.43■□□□□ 0.06
TPM4-202ENST00000344824 CHD9Q3L8U1 2897 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 VWA3AA6NCI4 1184 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 ZBTB42B2RXF5 422 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 PPP6R2O75170 966 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 UPP2O95045 317 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 VTNP04004 478 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 OR52Z1P0C646 297 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 CD52P31358 61 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 TXKP42681 527 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 GRIN1Q05586 938 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 TBC1D8BQ0IIM8 1120 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 PPP2R5CQ13362 524 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 FBXO47Q5MNV8 452 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 TSHZ1Q6ZSZ6 1077 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 RPAINQ86UA6 219 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 C4orf32Q8N8J7 132 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 KRI1Q8N9T8 703 aaKnown RBP15.42■□□□□ 0.06
TPM4-202ENST00000344824 PHOSPHO2Q8TCD6 241 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 APBB2Q92870 758 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 SCLT1Q96NL6 688 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 MAP7D2Q96T17 732 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 CDX2Q99626 313 aaPredicted RBP15.42■□□□□ 0.06
TPM4-202ENST00000344824 PRDM12Q9H4Q4 367 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 CERS4Q9HA82 394 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 SUGCTQ9HAC7 445 aa15.42■□□□□ 0.06
TPM4-202ENST00000344824 FBXO2Q9UK22 296 aaPredicted RBP15.42■□□□□ 0.06
TPM4-202ENST00000344824 FOSL2P15408 326 aa15.41■□□□□ 0.06
TPM4-202ENST00000344824 PSMC5P62195 406 aa15.41■□□□□ 0.06
TPM4-202ENST00000344824 UBE2HP62256 183 aa15.41■□□□□ 0.06
TPM4-202ENST00000344824 CYP4A11Q02928 519 aa15.41■□□□□ 0.06
TPM4-202ENST00000344824 PAK2Q13177 524 aa15.41■□□□□ 0.06
TPM4-202ENST00000344824 ORC2Q13416 577 aaPredicted RBP15.41■□□□□ 0.06
TPM4-202ENST00000344824 GRIN2CQ14957 1233 aa15.41■□□□□ 0.06
TPM4-202ENST00000344824 TMEM266Q2M3C6 531 aa15.41■□□□□ 0.06
TPM4-202ENST00000344824 SPECC1Q5M775 1068 aa15.41■□□□□ 0.06
TPM4-202ENST00000344824 PLA2G4FQ68DD2 849 aa15.41■□□□□ 0.06
TPM4-202ENST00000344824 B3GNT9Q6UX72 402 aa15.41■□□□□ 0.06
TPM4-202ENST00000344824 ZNF668Q96K58 619 aaPredicted RBP15.41■□□□□ 0.06
TPM4-202ENST00000344824 LXNQ9BS40 222 aa15.41■□□□□ 0.06
TPM4-202ENST00000344824 CELF4Q9BZC1 486 aaKnown RBP15.41■□□□□ 0.06
TPM4-202ENST00000344824 BMP2KQ9NSY1 1161 aaPredicted RBP15.41■□□□□ 0.06
TPM4-202ENST00000344824 CUTAO60888 179 aa15.4■□□□□ 0.06
TPM4-202ENST00000344824 TMOD1P28289 359 aa15.4■□□□□ 0.06
TPM4-202ENST00000344824 CTTNQ14247 550 aaKnown RBP15.4■□□□□ 0.06
TPM4-202ENST00000344824 KIZQ2M2Z5 673 aa15.4■□□□□ 0.06
TPM4-202ENST00000344824 XKR3Q5GH77 459 aa15.4■□□□□ 0.06
TPM4-202ENST00000344824 EFCAB12Q6NXP0 572 aa15.4■□□□□ 0.06
TPM4-202ENST00000344824 DYDC2Q96IM9 177 aa15.4■□□□□ 0.06
TPM4-202ENST00000344824 GAS2L1Q99501 681 aaPredicted RBP15.4■□□□□ 0.06
TPM4-202ENST00000344824 OSMRQ99650 979 aa15.4■□□□□ 0.06
TPM4-202ENST00000344824 SRPRBQ9Y5M8 271 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms