RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 MYRIPQ8NFW9 859 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 ATP6V0A1Q93050 837 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 CEP170P1Q96L14 293 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 LZTFL1Q9NQ48 299 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 STBD1O95210 358 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 SLC25A27O95847 323 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 PLS3P13797 630 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 DCAF17Q5H9S7 520 aaPredicted RBP24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 FIGNQ5HY92 759 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 STXBP4Q6ZWJ1 553 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 SYCP3Q8IZU3 236 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 STRA6Q9BX79 667 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 PAXBP1Q9Y5B6 917 aa24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 PPP1R37O75864 691 aa24.64■■□□□ 1.54
PDLIM2-203ENST00000339162 EDNRBP24530 442 aa24.64■■□□□ 1.54
PDLIM2-203ENST00000339162 ICAM3P32942 547 aa24.64■■□□□ 1.54
PDLIM2-203ENST00000339162 PEX3P56589 373 aa24.64■■□□□ 1.54
PDLIM2-203ENST00000339162 FRMD5Q7Z6J6 570 aa24.64■■□□□ 1.54
PDLIM2-203ENST00000339162 KIF18AQ8NI77 898 aa24.64■■□□□ 1.54
PDLIM2-203ENST00000339162 GBP3Q9H0R5 595 aa24.64■■□□□ 1.54
PDLIM2-203ENST00000339162 DNAI1Q9UI46 699 aa24.64■■□□□ 1.54
PDLIM2-203ENST00000339162 TISP43B9A030 160 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 FANCGO15287 622 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 UBA1P22314 1058 aaKnown RBP24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 CYP2J2P51589 502 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 ETF1P62495 437 aaKnown RBP24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 PRKCEQ02156 737 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 TCERG1LQ5VWI1 586 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 TSC1Q92574 1164 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 IRX2Q9BZI1 471 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 PORCNQ9H237 461 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 AGPAT3Q9NRZ7 376 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 SEPT9Q9UHD8 586 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 A0A1W2PQJ5 194 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 KIF2AO00139 706 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 SLC16A4O15374 487 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 MIS18BP1Q6P0N0 1132 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 HS2ST1Q7LGA3 356 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 ZNF397Q8NF99 534 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 FGD4Q96M96 766 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 MMP19Q99542 508 aa24.63■■□□□ 1.53
PDLIM2-203ENST00000339162 SUPT20HL2P0C7V6 817 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 EPB41P11171 864 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 ERVK-9P63128 1117 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 KCTD2Q14681 263 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 OTUD6AQ7L8S5 288 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 NEK11Q8NG66 645 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 DRC1Q96MC2 740 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 KIFC3Q9BVG8 833 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 EFCC1Q9HA90 598 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 FAM184BQ9ULE4 1060 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 ABL1P00519 1130 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 XRCC5P13010 732 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 MEA1Q16626 185 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 RRAGAQ7L523 313 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 LSM14BQ9BX40 385 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 NLRC4Q9NPP4 1024 aa24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 EPN1Q9Y6I3 576 aaPredicted RBP24.62■■□□□ 1.53
PDLIM2-203ENST00000339162 SYNGAP1Q96PV0 1343 aa24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 LY6KQ17RY6 165 aa24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 HAUS6Q7Z4H7 955 aa24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 MS4A4AQ96JQ5 239 aa24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 ZNHIT6Q9NWK9 470 aaKnown RBP24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 UBE4BO95155 1302 aa24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 LRRC53A6NM62 1247 aa24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 NOL4O94818 638 aa24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 NDUFA10O95299 355 aa24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 PLEKP08567 350 aaPredicted RBP24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 RDH13Q8NBN7 331 aa24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 WDR81Q562E7 1941 aa24.61■■□□□ 1.53
PDLIM2-203ENST00000339162 CCDC169A6NNP5 214 aa24.6■■□□□ 1.53
PDLIM2-203ENST00000339162 PDHXO00330 501 aa24.6■■□□□ 1.53
PDLIM2-203ENST00000339162 SLC16A3O15427 465 aaKnown RBP24.6■■□□□ 1.53
PDLIM2-203ENST00000339162 ATP4AP20648 1035 aa24.6■■□□□ 1.53
PDLIM2-203ENST00000339162 CACNA2D4Q7Z3S7 1137 aa24.6■■□□□ 1.53
PDLIM2-203ENST00000339162 FAM186BQ8IYM0 893 aa24.6■■□□□ 1.53
PDLIM2-203ENST00000339162 PCIF1Q9H4Z3 704 aa24.6■■□□□ 1.53
PDLIM2-203ENST00000339162 GBA2Q9HCG7 927 aaPredicted RBP24.6■■□□□ 1.53
PDLIM2-203ENST00000339162 CCL15-CCL14A0A0B4J2E2 113 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 GOLGA6L9A6NEM1 432 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 SOCS7O14512 581 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 CELF2O95319 508 aaKnown RBP24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 AFPP02771 609 aaKnown RBP24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 GNG11P61952 73 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 CCL15Q16663 113 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 MTERF2Q49AM1 385 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 ANKRD13CQ8N6S4 541 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 BSNDQ8WZ55 320 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 BAP1Q92560 729 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 SLC35C1Q96A29 364 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 WDR24Q96S15 920 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 NHEJ1Q9H9Q4 299 aaPredicted RBP24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 ZNF302Q9NR11 478 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 CYP26B1Q9NR63 512 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 REXO2Q9Y3B8 237 aaKnown RBP24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 BTBD19C9JJ37 291 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 FARP2O94887 1054 aaPredicted RBP24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 ARIH2O95376 493 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 PSMC2P35998 433 aaKnown RBP24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 METTL14Q9HCE5 456 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms