RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TAOK3Q9H2K8 898 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 TYW1Q9NV66 732 aaKnown RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 L1RE1Q9UN81 338 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 PHF20L1A8MW92 1017 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 CALUO43852 315 aaPredicted RBP9.68□□□□□ -0.86
SNCA-201ENST00000336904 HNRNPH3P31942 346 aaKnown RBP9.68□□□□□ -0.86
SNCA-201ENST00000336904 COPB2P35606 906 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 LMAN1P49257 510 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 SPATA4Q8NEY3 305 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 TRIM58Q8NG06 486 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 IFT81Q8WYA0 676 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 SAAL1Q96ER3 474 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 CCDC43Q96MW1 224 aaKnown RBP9.68□□□□□ -0.86
SNCA-201ENST00000336904 ALS2CR12Q96Q35 445 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 FIZ1Q96SL8 496 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 SIX2Q9NPC8 291 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 TAS2R14Q9NYV8 317 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 ZHX2Q9Y6X8 837 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 PITPNM2Q9BZ72 1349 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 PIK3CDO00329 1044 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 TBX3O15119 743 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 CLSTN1O94985 981 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 GCLMP48507 274 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 PEX3P56589 373 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 MTMR1Q13613 665 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 BRD3Q15059 726 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 EPHA7Q15375 998 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 TTC19Q6DKK2 380 aaPredicted RBP9.68□□□□□ -0.86
SNCA-201ENST00000336904 MOXD1Q6UVY6 613 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 IRF2BP2Q7Z5L9 587 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 CCDC127Q96BQ5 260 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 TEPSINQ96N21 525 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 NOX5Q96PH1 765 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 MXRA8Q9BRK3 442 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 POLR3CQ9BUI4 534 aaPredicted RBP9.68□□□□□ -0.86
SNCA-201ENST00000336904 AP1M1Q9BXS5 423 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 DEFB129Q9H1M3 183 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 OSGEPQ9NPF4 335 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 PIM2Q9P1W9 311 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 TCEAL9Q9UHQ7 104 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 JRKLQ9Y4A0 524 aa9.68□□□□□ -0.86
SNCA-201ENST00000336904 BACH1O14867 736 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 ECM2O94769 699 aaPredicted RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 SSTR3P32745 418 aaPredicted RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 EDRF1Q3B7T1 1238 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 TKFCQ3LXA3 575 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 FAM102BQ5T8I3 360 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 TAF3Q5VWG9 929 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 PHLDB2Q86SQ0 1253 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 EHBP1Q8NDI1 1231 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 SYTL5Q8TDW5 730 aaPredicted RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 CNKSR2Q8WXI2 1034 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 WRNIP1Q96S55 665 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 RMDN3Q96TC7 470 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 PSMD1Q99460 953 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 AGPAT3Q9NRZ7 376 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 TOPORSQ9NS56 1045 aaPredicted RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 RAB21Q9UL25 225 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 TRAF3IP3Q9Y228 551 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 A0A0U1RQG5 324 aaPredicted RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 GRID2IPA4D2P6 1211 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 CCDC169A6NNP5 214 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 PDXKO00764 312 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 KCNK3O14649 394 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 ATMINO43313 823 aaPredicted RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 NPM3O75607 178 aaKnown RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 GUCY2FP51841 1108 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 FSTL1Q12841 308 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 MAPK7Q13164 816 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 PPP2R5CQ13362 524 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 BAATQ14032 418 aaPredicted RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 SLC18A3Q16572 532 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 DALRD3Q5D0E6 543 aaKnown RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 ANGEL2Q5VTE6 544 aaKnown RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 LMBRD2Q68DH5 695 aaPredicted RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 DPY19L2P1Q6NXN4 242 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 SND1Q7KZF4 910 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNCA-201ENST00000336904 ZNF720Q7Z2F6 126 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 HDXQ7Z353 690 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 SLC20A1Q8WUM9 679 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 PGAP2Q9UHJ9 254 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 CNOT7Q9UIV1 285 aaKnown RBP9.67□□□□□ -0.86
SNCA-201ENST00000336904 FEM1BQ9UK73 627 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 IGSF9BQ9UPX0 1349 aa9.67□□□□□ -0.86
SNCA-201ENST00000336904 TMEM110-MUSTN1A8MSY1 372 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 EVI5O60447 810 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 ERLIN1O75477 346 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 CCNE2O96020 404 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 ICAM1P05362 532 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 PTGER2P43116 358 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 ALKBH5Q6P6C2 394 aaKnown RBP9.66□□□□□ -0.86
SNCA-201ENST00000336904 GBP6Q6ZN66 633 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 PRPF38AQ8NAV1 312 aaKnown RBP9.66□□□□□ -0.86
SNCA-201ENST00000336904 KRT12Q99456 494 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 TSGA10Q9BZW7 698 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 MYH11P35749 1972 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 C10orf71Q711Q0 1435 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 KIF20AO95235 890 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 CDK17Q00537 523 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 GABPB1Q06547 395 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms