RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SIK3Q9Y2K2 1263 aa19.64■□□□□ 0.73
RAB39A-201ENST00000320578 KIAA1217Q5T5P2 1943 aa19.64■□□□□ 0.73
RAB39A-201ENST00000320578 ASB14A6NK59 587 aa19.63■□□□□ 0.73
RAB39A-201ENST00000320578 STRNO43815 780 aa19.63■□□□□ 0.73
RAB39A-201ENST00000320578 USO1O60763 962 aaKnown RBP19.63■□□□□ 0.73
RAB39A-201ENST00000320578 DGAT1O75907 488 aa19.63■□□□□ 0.73
RAB39A-201ENST00000320578 KRT9P35527 623 aa19.63■□□□□ 0.73
RAB39A-201ENST00000320578 CYFIP1Q7L576 1253 aa19.63■□□□□ 0.73
RAB39A-201ENST00000320578 HS2ST1Q7LGA3 356 aa19.63■□□□□ 0.73
RAB39A-201ENST00000320578 CCDC60Q8IWA6 550 aaPredicted RBP19.63■□□□□ 0.73
RAB39A-201ENST00000320578 SMCR8Q8TEV9 937 aaPredicted RBP19.63■□□□□ 0.73
RAB39A-201ENST00000320578 CPLX3Q8WVH0 158 aa19.63■□□□□ 0.73
RAB39A-201ENST00000320578 BCAS3Q9H6U6 928 aa19.63■□□□□ 0.73
RAB39A-201ENST00000320578 PPME1Q9Y570 386 aa19.63■□□□□ 0.73
RAB39A-201ENST00000320578 ZMYM2Q9UBW7 1377 aa19.63■□□□□ 0.73
RAB39A-201ENST00000320578 TTC26A0AVF1 554 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 GOLGA6L9A6NEM1 432 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 FARP2O94887 1054 aaPredicted RBP19.62■□□□□ 0.73
RAB39A-201ENST00000320578 CYP2C8P10632 490 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 GTF2BQ00403 316 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 METTL7BQ6UX53 244 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 MCPH1Q8NEM0 835 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 SPIRE2Q8WWL2 714 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 KCNN1Q92952 543 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 HVCN1Q96D96 273 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 NTPCRQ9BSD7 190 aaKnown RBP19.62■□□□□ 0.73
RAB39A-201ENST00000320578 GBP3Q9H0R5 595 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 R3HDMLQ9H3Y0 253 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 DMAC2Q9NW81 257 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.62■□□□□ 0.73
RAB39A-201ENST00000320578 RASSF10A6NK89 507 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 SCP2P22307 547 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 ABCD1P33897 745 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 NCKAP1LP55160 1127 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 ZBED6P86452 979 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 DNTTIP2Q5QJE6 756 aaKnown RBP19.62■□□□□ 0.73
RAB39A-201ENST00000320578 UTP14CQ5TAP6 766 aaKnown RBP19.62■□□□□ 0.73
RAB39A-201ENST00000320578 C12orf56Q8IXR9 622 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 AFAP1L1Q8TED9 768 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 CEP170P1Q96L14 293 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 POLD4Q9HCU8 107 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 ZNF302Q9NR11 478 aa19.62■□□□□ 0.73
RAB39A-201ENST00000320578 ARMCX3Q9UH62 379 aaPredicted RBP19.62■□□□□ 0.73
RAB39A-201ENST00000320578 NKRFO15226 690 aaKnown RBP eCLIP19.61■□□□□ 0.73
RAB39A-201ENST00000320578 ITGBL1O95965 494 aaPredicted RBP19.61■□□□□ 0.73
RAB39A-201ENST00000320578 EPB41P11171 864 aaKnown RBP19.61■□□□□ 0.73
RAB39A-201ENST00000320578 TRIM21P19474 475 aaKnown RBP19.61■□□□□ 0.73
RAB39A-201ENST00000320578 NPEPPSP55786 919 aa19.61■□□□□ 0.73
RAB39A-201ENST00000320578 PRKCEQ02156 737 aa19.61■□□□□ 0.73
RAB39A-201ENST00000320578 ZC2HC1CQ53FD0 456 aaPredicted RBP19.61■□□□□ 0.73
RAB39A-201ENST00000320578 CYP26C1Q6V0L0 522 aa19.61■□□□□ 0.73
RAB39A-201ENST00000320578 ZNF397Q8NF99 534 aaPredicted RBP19.61■□□□□ 0.73
RAB39A-201ENST00000320578 PPP1R13BQ96KQ4 1090 aa19.61■□□□□ 0.73
RAB39A-201ENST00000320578 ACCSQ96QU6 501 aa19.61■□□□□ 0.73
RAB39A-201ENST00000320578 PARK7Q99497 189 aaKnown RBP19.61■□□□□ 0.73
RAB39A-201ENST00000320578 NIFKQ9BYG3 293 aaKnown RBP19.61■□□□□ 0.73
RAB39A-201ENST00000320578 CYP26B1Q9NR63 512 aa19.61■□□□□ 0.73
RAB39A-201ENST00000320578 DDX41Q9UJV9 622 aaKnown RBP19.61■□□□□ 0.73
RAB39A-201ENST00000320578 LRRC37A2A6NM11 1700 aa19.61■□□□□ 0.73
RAB39A-201ENST00000320578 USP27XA6NNY8 438 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 RNF225M0QZC1 329 aaPredicted RBP19.6■□□□□ 0.73
RAB39A-201ENST00000320578 PGK2P07205 417 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 CDK17Q00537 523 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 KCNA1Q09470 495 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 PTPN14Q15678 1187 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 MEA1Q16626 185 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 TSR1Q2NL82 804 aaKnown RBP19.6■□□□□ 0.73
RAB39A-201ENST00000320578 PLA2G4FQ68DD2 849 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 ZNF467Q7Z7K2 595 aaPredicted RBP19.6■□□□□ 0.73
RAB39A-201ENST00000320578 SEPT1Q8WYJ6 367 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 PORCNQ9H237 461 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 ZCCHC17Q9NP64 241 aaKnown RBP19.6■□□□□ 0.73
RAB39A-201ENST00000320578 GSTTP1A0A1W2PQM5 241 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 K7ENM7 598 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 HNRNPH3P31942 346 aaKnown RBP19.6■□□□□ 0.73
RAB39A-201ENST00000320578 PSMC2P35998 433 aaKnown RBP19.6■□□□□ 0.73
RAB39A-201ENST00000320578 SMTNP53814 917 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 ZNF792Q3KQV3 632 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 FAM160B1Q5W0V3 765 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 CST9Q5W186 159 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 CHADLQ6NUI6 762 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 BORCS6Q96GS4 357 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 PRIMPOLQ96LW4 560 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 EFCC1Q9HA90 598 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 AGPAT3Q9NRZ7 376 aa19.6■□□□□ 0.73
RAB39A-201ENST00000320578 AKAP3O75969 853 aa19.59■□□□□ 0.73
RAB39A-201ENST00000320578 OATP04181 439 aa19.59■□□□□ 0.73
RAB39A-201ENST00000320578 TNNT1P13805 278 aa19.59■□□□□ 0.73
RAB39A-201ENST00000320578 CCDC62Q6P9F0 684 aa19.59■□□□□ 0.73
RAB39A-201ENST00000320578 ATP6V0A4Q9HBG4 840 aa19.59■□□□□ 0.73
RAB39A-201ENST00000320578 PPP2R2CQ9Y2T4 447 aa19.59■□□□□ 0.73
RAB39A-201ENST00000320578 TMEM150BA6NC51 233 aa19.58■□□□□ 0.73
RAB39A-201ENST00000320578 H0YCG3 227 aa19.58■□□□□ 0.73
RAB39A-201ENST00000320578 FAM110CQ1W6H9 321 aa19.58■□□□□ 0.73
RAB39A-201ENST00000320578 CELF3Q5SZQ8 465 aaKnown RBP19.58■□□□□ 0.73
RAB39A-201ENST00000320578 FAM102BQ5T8I3 360 aa19.58■□□□□ 0.73
RAB39A-201ENST00000320578 HAUS6Q7Z4H7 955 aa19.58■□□□□ 0.73
RAB39A-201ENST00000320578 REXO1L1PQ8IX06 675 aa19.58■□□□□ 0.73
RAB39A-201ENST00000320578 PCMTD1Q96MG8 357 aaPredicted RBP19.58■□□□□ 0.73
RAB39A-201ENST00000320578 NRBP2Q9NSY0 501 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms