RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PBXIP1Q96AQ6 731 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 AP1M1Q9BXS5 423 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 KDM4CQ9H3R0 1056 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 DENND4BO75064 1496 aaPredicted RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 GJC2Q5T442 439 aaPredicted RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 TM6SF1Q9BZW5 370 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 STOML1Q9UBI4 398 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 KAT6BQ8WYB5 2073 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 CFAP69A5D8W1 941 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 APBA3O96018 575 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 HNRNPCP07910 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLIP1-201ENST00000302528 DDX5P17844 614 aaKnown RBP11.09□□□□□ -0.63
CLIP1-201ENST00000302528 RWDD2BP57060 319 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 THEM5Q8N1Q8 247 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 ASIC4Q96FT7 647 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 ZNF197O14709 1029 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 TJP3O95049 919 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 MYL1P05976 194 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 KCNA2P16389 499 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 ANO4Q32M45 955 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 KRT39Q6A163 491 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 LRRC31Q6UY01 552 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 ZBTB12Q9Y330 459 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-201ENST00000302528 ZNF521Q96K83 1311 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 MAGI2Q86UL8 1455 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 DEAF1O75398 565 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-201ENST00000302528 ATP5JP18859 108 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 AP2B1P63010 937 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 ICA1LQ8NDH6 482 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 CDHR1Q96JP9 859 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 TRIM54Q9BYV2 358 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 TRIM8Q9BZR9 551 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 ATP6V0A4Q9HBG4 840 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 CLCA2Q9UQC9 943 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-201ENST00000302528 ATP5HO75947 161 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 USP14P54578 494 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 FKBP3Q00688 224 aaKnown RBP11.09□□□□□ -0.63
CLIP1-201ENST00000302528 RBBP7Q16576 425 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 SLC10A5Q5PT55 438 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 MMS22LQ6ZRQ5 1243 aa11.09□□□□□ -0.63
CLIP1-201ENST00000302528 PFKFB2O60825 505 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 GYG1P46976 350 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 STXBP2Q15833 593 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 FAM47EQ6ZV65 393 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 IP6K1Q92551 441 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 TMEM161AQ9NX61 479 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 TSR3Q9UJK0 312 aaKnown RBP11.08□□□□□ -0.64
CLIP1-201ENST00000302528 CTIFO43310 598 aaKnown RBP11.08□□□□□ -0.64
CLIP1-201ENST00000302528 DIAPH2O60879 1101 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 FBXO2Q9UK22 296 aaPredicted RBP11.08□□□□□ -0.64
CLIP1-201ENST00000302528 CLIC4Q9Y696 253 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 CCDC195A0A1B0GUA6 201 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 MMEP08473 750 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 BAG6P46379 1132 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 CHMP1BQ7LBR1 199 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 NDFIP2Q9NV92 336 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 GEMIN8Q9NWZ8 242 aaKnown RBP11.08□□□□□ -0.64
CLIP1-201ENST00000302528 HAUS5O94927 633 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 SERPING1P05155 500 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 CEP78Q5JTW2 689 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 AK8Q96MA6 479 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 BCORL1Q5H9F3 1711 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 RASA4BC9J798 803 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 RASA4O43374 803 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 SMARCA1P28370 1054 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 RANBP1P43487 201 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 GPATCH4Q5T3I0 446 aaKnown RBP11.08□□□□□ -0.64
CLIP1-201ENST00000302528 LRRC8EQ6NSJ5 796 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 ADCK1Q86TW2 530 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 RAB42Q8N4Z0 105 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 SYNDIG1Q9H7V2 258 aa11.08□□□□□ -0.64
CLIP1-201ENST00000302528 SPDYE5A6NIY4 337 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 MEIS1O00470 390 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 GUCA1CO95843 209 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 EIF4A3P38919 411 aaKnown RBP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 CTSWP56202 376 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 SLC7A5Q01650 507 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 CUL1Q13616 776 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 SPDYE7PQ495Y7 208 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 BTNL9Q6UXG8 535 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 EEPD1Q7L9B9 569 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 DDIASQ8IXT1 998 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 OLFM3Q96PB7 478 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 KIF2CQ99661 725 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 SH3GL2Q99962 352 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 MRPS26Q9BYN8 205 aaKnown RBP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 TMEM245Q9H330 911 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 DIABLOQ9NR28 239 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 MED23Q9ULK4 1368 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 HOXB7P09629 217 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 TBL3Q12788 808 aaKnown RBP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 ACCSLQ4AC99 568 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 ASPRV1Q53RT3 343 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 BEND6Q5SZJ8 279 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 DNAJC10Q8IXB1 793 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 MSTO1Q9BUK6 570 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 ASCC2Q9H1I8 757 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 C19orf44Q9H6X5 657 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 ABCC12Q96J65 1359 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms