RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 LONRF1Q17RB8 773 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 NT5DC1Q5TFE4 455 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 MIER3Q7Z3K6 550 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 HIPK4Q8NE63 616 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 MAML1Q92585 1016 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 USP40Q9NVE5 1235 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 IRAK4Q9NWZ3 460 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 PNPLA7Q6ZV29 1317 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 PLS3P13797 630 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 PTK2Q05397 1052 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 SLC29A2Q14542 456 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.42■□□□□ 0.22
DDB1-201ENST00000301764 TTI2Q6NXR4 508 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 ADAM33Q9BZ11 813 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 FAF1Q9UNN5 650 aaPredicted RBP16.42■□□□□ 0.22
DDB1-201ENST00000301764 SPAG7O75391 227 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 MT-ND3P03897 115 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 PRLRP16471 622 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 MXI1P50539 228 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 GALCP54803 685 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 CDR2Q01850 454 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 FAM102BQ5T8I3 360 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 RNF207Q6ZRF8 634 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 RFX8Q6ZV50 586 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 C7orf25Q9BPX7 421 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 GAP43P17677 238 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 CCND1P24385 295 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 LMNB2Q03252 620 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 RASA3Q14644 834 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 PIGBQ92521 554 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 TMBIM4Q9HC24 238 aa16.42■□□□□ 0.22
DDB1-201ENST00000301764 DDX20Q9UHI6 824 aaKnown RBP16.42■□□□□ 0.22
DDB1-201ENST00000301764 PAX7P23759 505 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 TRPC3Q13507 836 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 PIGOQ8TEQ8 1089 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 C1orf54Q8WWF1 131 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 MTMR8Q96EF0 704 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 FTLP02792 175 aaPredicted RBP16.41■□□□□ 0.22
DDB1-201ENST00000301764 BBS9Q3SYG4 887 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 SLFN13Q68D06 897 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 GLG1Q92896 1179 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 CAVIN3Q969G5 261 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 IWS1Q96ST2 819 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 PARVGQ9HBI0 331 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 TTC7AQ9ULT0 858 aaPredicted RBP16.41■□□□□ 0.22
DDB1-201ENST00000301764 SLC9A1P19634 815 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 RANBP1P43487 201 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 USP11P51784 963 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 DHX34Q14147 1143 aaKnown RBP16.41■□□□□ 0.22
DDB1-201ENST00000301764 KNOP1Q1ED39 458 aaKnown RBP16.41■□□□□ 0.22
DDB1-201ENST00000301764 GPATCH4Q5T3I0 446 aaKnown RBP16.41■□□□□ 0.22
DDB1-201ENST00000301764 TRIM59Q8IWR1 403 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 METTL13Q8N6R0 699 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 CEP120Q8N960 986 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 ATP2A3Q93084 1043 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 ZBTB10Q96DT7 871 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 ZBTB12Q9Y330 459 aaPredicted RBP16.41■□□□□ 0.22
DDB1-201ENST00000301764 CDC42BPGQ6DT37 1551 aa16.41■□□□□ 0.22
DDB1-201ENST00000301764 CEP170BQ9Y4F5 1589 aaPredicted RBP16.41■□□□□ 0.22
DDB1-201ENST00000301764 POTEFA5A3E0 1075 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 NDC80O14777 642 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 POTEIP0CG38 1075 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 CDK8P49336 464 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 DYNLT1P63172 113 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 POTEGQ6S5H5 508 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 POTEEQ6S8J3 1075 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 PPP4R1Q8TF05 950 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 ANGPTL2Q9UKU9 493 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 CFAP69A5D8W1 941 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 LMNAP02545 664 aaKnown RBP16.4■□□□□ 0.22
DDB1-201ENST00000301764 UCHL3P15374 230 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 GPC5P78333 572 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 MDM2Q00987 491 aaPredicted RBP16.4■□□□□ 0.22
DDB1-201ENST00000301764 EARS2Q5JPH6 523 aaKnown RBP16.4■□□□□ 0.22
DDB1-201ENST00000301764 MAP3K21Q5TCX8 1036 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 TMED8Q6PL24 325 aaPredicted RBP16.4■□□□□ 0.22
DDB1-201ENST00000301764 CREG2Q8IUH2 290 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 DTX3LQ8TDB6 740 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 TTC17Q96AE7 1141 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 NGLY1Q96IV0 654 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 TRIM55Q9BYV6 548 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 NUF2Q9BZD4 464 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 KIF9Q9HAQ2 790 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 ANAPC7Q9UJX3 599 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 USP17L5A8MUK1 530 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 HOXA7P31268 230 aaPredicted RBP16.4■□□□□ 0.22
DDB1-201ENST00000301764 CRKLP46109 303 aaKnown RBP16.4■□□□□ 0.22
DDB1-201ENST00000301764 CNPY4Q8N129 248 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 ERP27Q96DN0 273 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 TTC1Q99614 292 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 MAD1L1Q9Y6D9 718 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 STXBP3O00186 592 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 TTMPQ5BVD1 217 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
DDB1-201ENST00000301764 AMNQ9BXJ7 453 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 PACSIN1Q9BY11 444 aa16.4■□□□□ 0.22
DDB1-201ENST00000301764 TMEM120BA0PK00 339 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 USP17L15C9J2P7 530 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 USP17L13C9JLJ4 530 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 USP17L11C9JVI0 530 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms