RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 TMEM47Q9BQJ4 181 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 C11orf70Q9BRQ4 267 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 IKBKBO14920 756 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 NLRP11P59045 1033 aaKnown RBP16.58■□□□□ 0.24
FNDC1-201ENST00000297267 NOP14P78316 857 aaKnown RBP16.58■□□□□ 0.24
FNDC1-201ENST00000297267 GRAMD1BQ3KR37 738 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 SWSAP1Q6NVH7 229 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 ARHGEF25Q86VW2 580 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 HACE1Q8IYU2 909 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 ZNF513Q8N8E2 541 aaPredicted RBP16.58■□□□□ 0.24
FNDC1-201ENST00000297267 ACSF2Q96CM8 615 aaPredicted RBP16.58■□□□□ 0.24
FNDC1-201ENST00000297267 BEGAINQ9BUH8 593 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 ATMINO43313 823 aaPredicted RBP16.57■□□□□ 0.24
FNDC1-201ENST00000297267 CA4P22748 312 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 INPP1P49441 399 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 PPP1R18Q6NYC8 613 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 DSTYKQ6XUX3 929 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 ERICH1Q86X53 443 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 GABPB2Q8TAK5 448 aaPredicted RBP16.57■□□□□ 0.24
FNDC1-201ENST00000297267 GTSE1Q9NYZ3 720 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 TADA3O75528 432 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 ZBTB7AO95365 584 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 GUCY2CP25092 1073 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 FKBP3Q00688 224 aaKnown RBP16.57■□□□□ 0.24
FNDC1-201ENST00000297267 SHC4Q6S5L8 630 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 RIN2Q8WYP3 895 aaPredicted RBP16.57■□□□□ 0.24
FNDC1-201ENST00000297267 WDR24Q96S15 920 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 GOLPH3Q9H4A6 298 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 MRPL42Q9Y6G3 142 aaKnown RBP16.57■□□□□ 0.24
FNDC1-201ENST00000297267 IGSF1Q8N6C5 1336 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 MOCS2O96007 188 aaPredicted RBP16.57■□□□□ 0.24
FNDC1-201ENST00000297267 MTMR1Q13613 665 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 TFDP1Q14186 410 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 SIX6OS1Q8N1H7 587 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 SH2D3CQ8N5H7 860 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 LRRC4Q9HBW1 653 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 ALKBH5Q6P6C2 394 aaKnown RBP16.57■□□□□ 0.24
FNDC1-201ENST00000297267 RASSF3Q86WH2 238 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 TAL1P17542 331 aaPredicted RBP16.57■□□□□ 0.24
FNDC1-201ENST00000297267 POLR2BP30876 1174 aaKnown RBP16.57■□□□□ 0.24
FNDC1-201ENST00000297267 POU5F1BQ06416 359 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 TNFAIP1Q13829 316 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 LRRC36Q1X8D7 754 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 SCN4BQ8IWT1 228 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 VPS11Q9H270 941 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
FNDC1-201ENST00000297267 STOX1Q6ZVD7 989 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 ZBED1O96006 694 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 GALNT17Q6IS24 598 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 DNAAF5Q86Y56 855 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 RAD54LQ92698 747 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 ABT1Q9ULW3 272 aaKnown RBP16.56■□□□□ 0.24
FNDC1-201ENST00000297267 SRGAP2BP0DMP2 458 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 PSMD2Q13200 908 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 DPY19L2Q6NUT2 758 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 ECT2Q9H8V3 914 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 CNOT8Q9UFF9 292 aaKnown RBP16.56■□□□□ 0.24
FNDC1-201ENST00000297267 KCNH2Q12809 1159 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 CPA5Q8WXQ8 436 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 YIPF3Q9GZM5 350 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 RGL1Q9NZL6 768 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 MINPP1Q9UNW1 487 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 RPAP1Q9BWH6 1393 aaPredicted RBP16.56■□□□□ 0.24
FNDC1-201ENST00000297267 SEC24DO94855 1032 aaPredicted RBP16.56■□□□□ 0.24
FNDC1-201ENST00000297267 ESRRAP11474 423 aaPredicted RBP16.56■□□□□ 0.24
FNDC1-201ENST00000297267 PPARGC1AQ9UBK2 798 aaKnown RBP16.56■□□□□ 0.24
FNDC1-201ENST00000297267 JRKLQ9Y4A0 524 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 USP6P35125 1406 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 CPDO75976 1380 aa16.56■□□□□ 0.24
FNDC1-201ENST00000297267 OSBPP22059 807 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 CCNE1P24864 410 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 GANCQ8TET4 914 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 CHP1Q99653 195 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 DBR1Q9UK59 544 aaKnown RBP16.55■□□□□ 0.24
FNDC1-201ENST00000297267 WDR64B1ANS9 1081 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 RASA4BC9J798 803 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 RASA4O43374 803 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 PSAPP07602 524 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 XPAP23025 273 aaPredicted RBP16.55■□□□□ 0.24
FNDC1-201ENST00000297267 ENOX1Q8TC92 643 aaKnown RBP16.55■□□□□ 0.24
FNDC1-201ENST00000297267 OSBPL3Q9H4L5 887 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 BAG5Q9UL15 447 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 NPC1L1Q9UHC9 1359 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 TTC4O95801 387 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 ARL4AP40617 200 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 FMR1Q06787 632 aaKnown RBP eCLIP16.55■□□□□ 0.24
FNDC1-201ENST00000297267 DCAF15Q66K64 600 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 SFMBT1Q9UHJ3 866 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 TLK1Q9UKI8 766 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 MAP3K7O43318 606 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 ECE2O60344 883 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 DNAJC6O75061 913 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 ZSCAN20P17040 1043 aaPredicted RBP16.55■□□□□ 0.24
FNDC1-201ENST00000297267 TMPRSS15P98073 1019 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 RSBN1LQ6PCB5 846 aaPredicted RBP16.55■□□□□ 0.24
FNDC1-201ENST00000297267 NBPF3Q9H094 633 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 ATG3Q9NT62 314 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 K7ERI5 159 aa16.55■□□□□ 0.24
FNDC1-201ENST00000297267 SEMA3EO15041 775 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms