RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 HVCN1Q96D96 273 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 FAM129AQ9BZQ8 928 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 OSGEPQ9NPF4 335 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 GCNT4Q9P109 453 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 AMFRQ9UKV5 643 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 PNMA2Q9UL42 364 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 COL24A1Q17RW2 1714 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 IGKV6D-41A0A0C4DH26 115 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 PDXKO00764 312 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 DDX3YO15523 660 aaKnown RBP11.07□□□□□ -0.64
CCDC36-201ENST00000296449 KIF1CO43896 1103 aaKnown RBP11.07□□□□□ -0.64
CCDC36-201ENST00000296449 CTNND1O60716 968 aaKnown RBP11.07□□□□□ -0.64
CCDC36-201ENST00000296449 DNAJC8O75937 253 aaPredicted RBP11.07□□□□□ -0.64
CCDC36-201ENST00000296449 GFPT2O94808 682 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 SHBGP04278 402 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 CASP4P49662 377 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 MMP14P50281 582 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 PTENP60484 403 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 PSMC6P62333 389 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 SLC30A5Q8TAD4 765 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 LNX1Q8TBB1 728 aaPredicted RBP11.07□□□□□ -0.64
CCDC36-201ENST00000296449 ZNF317Q96PQ6 595 aaPredicted RBP11.07□□□□□ -0.64
CCDC36-201ENST00000296449 NAP1L4Q99733 375 aaKnown RBP11.07□□□□□ -0.64
CCDC36-201ENST00000296449 REEP2Q9BRK0 252 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 ZDHHC18Q9NUE0 388 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 DONSONQ9NYP3 566 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 PPP1R9AQ9ULJ8 1098 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 CNTNAP4Q9C0A0 1308 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 USP17L15C9J2P7 530 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 USP17L13C9JLJ4 530 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 USP17L11C9JVI0 530 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 USP17L18D6R9N7 530 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 USP17L22D6RA61 530 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 USP17L17D6RBQ6 530 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 USP17L19D6RCP7 530 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 USP17L20D6RJB6 530 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 OPLAHO14841 1288 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 CALUO43852 315 aaPredicted RBP11.06□□□□□ -0.64
CCDC36-201ENST00000296449 NR3C1P04150 777 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 SLC16A2P36021 539 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 USP17L24Q0WX57 530 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 PPP2R5EQ16537 467 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 DUPD1Q68J44 220 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 USP17L6PQ6QN14 398 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 DPP8Q6V1X1 898 aaPredicted RBP11.06□□□□□ -0.64
CCDC36-201ENST00000296449 CATSPER3Q86XQ3 398 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 CEP57Q86XR8 500 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 RAB17Q9H0T7 212 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 DIS3Q9Y2L1 958 aaKnown RBP11.06□□□□□ -0.64
CCDC36-201ENST00000296449 THRAP3Q9Y2W1 955 aaKnown RBP11.06□□□□□ -0.64
CCDC36-201ENST00000296449 USP17L10C9JJH3 530 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 ZBTB5O15062 677 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 EVI5O60447 810 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 TRIM37O94972 964 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 NUDT17P0C025 328 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 FERP16591 822 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 ELF1P32519 619 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 COPB2P35606 906 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 DR1Q01658 176 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 PPATQ06203 517 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 GABPAQ06546 454 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 PABPC4Q13310 644 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCDC36-201ENST00000296449 HOOK3Q86VS8 718 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 SLC35G2Q8TBE7 412 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 SCLT1Q96NL6 688 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 ERP44Q9BS26 406 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 MXD3Q9BW11 206 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 METTL14Q9HCE5 456 aaKnown RBP11.06□□□□□ -0.64
CCDC36-201ENST00000296449 ERVK-5Q9HDB9 667 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 ODF2LQ9ULJ1 636 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 ASTN1O14525 1302 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 NCANO14594 1321 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 IGSF9BQ9UPX0 1349 aa11.06□□□□□ -0.64
CCDC36-201ENST00000296449 CCT8L1PA6NM43 557 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 MEIS1O00470 390 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 SLC16A3O15427 465 aaKnown RBP11.05□□□□□ -0.64
CCDC36-201ENST00000296449 PPIP5K2O43314 1243 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 MGRN1O60291 552 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 CHN1P15882 459 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 NF2P35240 595 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 KLRC3Q07444 240 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 SPIRE1Q08AE8 756 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 PRPF4BQ13523 1007 aaKnown RBP11.05□□□□□ -0.64
CCDC36-201ENST00000296449 GRAPQ13588 217 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 NBPF9Q3BBW0 867 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 C15orf52Q6ZUT6 534 aaKnown RBP11.05□□□□□ -0.64
CCDC36-201ENST00000296449 ADAT2Q7Z6V5 191 aaKnown RBP11.05□□□□□ -0.64
CCDC36-201ENST00000296449 GLYCTKQ8IVS8 523 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 CCDC197Q8NCU1 140 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 GRAPLQ8TC17 118 aaPredicted RBP11.05□□□□□ -0.64
CCDC36-201ENST00000296449 RFFLQ8WZ73 363 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 GLG1Q92896 1179 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 FAM163AQ96GL9 167 aaPredicted RBP11.05□□□□□ -0.64
CCDC36-201ENST00000296449 ADAM7Q9H2U9 754 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 PABPC3Q9H361 631 aaKnown RBP11.05□□□□□ -0.64
CCDC36-201ENST00000296449 CD209Q9NNX6 404 aa11.05□□□□□ -0.64
CCDC36-201ENST00000296449 TYW1Q9NV66 732 aaKnown RBP11.05□□□□□ -0.64
CCDC36-201ENST00000296449 CYP3A7-CYP3A51PA0A087WV96 503 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms