RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 SLC9A2Q9UBY0 812 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 SIP14410 1827 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 IGSF9BQ9UPX0 1349 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 K7ENM7 598 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 CLIC2O15247 247 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 ZNF862O60290 1169 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 EIF3JO75822 258 aaKnown RBP11.18□□□□□ -0.62
C9orf43-201ENST00000288462 AFPP02771 609 aaKnown RBP11.18□□□□□ -0.62
C9orf43-201ENST00000288462 PSAPP07602 524 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 COPB2P35606 906 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 CASP4P49662 377 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 ACTR2P61160 394 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 GNG11P61952 73 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 KCNH2Q12809 1159 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 MYBPC2Q14324 1141 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 PLA2G4FQ68DD2 849 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 ZNF662Q6ZS27 426 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 ANO5Q75V66 913 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 HS2ST1Q7LGA3 356 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 SLC9A9Q8IVB4 645 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 FAM133AQ8N9E0 248 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 LSM14BQ9BX40 385 aaKnown RBP11.18□□□□□ -0.62
C9orf43-201ENST00000288462 GBP3Q9H0R5 595 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 GANQ9H2C0 597 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 IKZF4Q9H2S9 585 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 NHEJ1Q9H9Q4 299 aaPredicted RBP11.18□□□□□ -0.62
C9orf43-201ENST00000288462 LZTFL1Q9NQ48 299 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 SOWAHBA6NEL2 793 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 LRRC53A6NM62 1247 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 EIF3CLB5ME19 914 aaKnown RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 SLC25A27O95847 323 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 XRCC5P13010 732 aaKnown RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 CYLC1P35663 651 aaPredicted RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 NCKAP1LP55160 1127 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 XKR9Q5GH70 373 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 UTP14CQ5TAP6 766 aaKnown RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 GPAT2Q6NUI2 795 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 DPY19L2P1Q6NXN4 242 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 ABHD15Q6UXT9 468 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 FASTKD5Q7L8L6 764 aaKnown RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 KSR1Q8IVT5 923 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 C12orf56Q8IXR9 622 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 SYN2Q92777 582 aaPredicted RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 SLC35C1Q96A29 364 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 EIF3CQ99613 913 aaKnown RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 GABBR1Q9UBS5 961 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 TELO2Q9Y4R8 837 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 KIF5CO60282 957 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 SUPT20HL2P0C7V6 817 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 PSMC2P35998 433 aaKnown RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 GJA5P36382 358 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 NPEPPSP55786 919 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 FSTL1Q12841 308 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 ARHGAP29Q52LW3 1261 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 EAPPQ56P03 285 aaPredicted RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 PNMA8AQ86V59 439 aaPredicted RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 NCAPG2Q86XI2 1143 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 CCDC60Q8IWA6 550 aaPredicted RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 FAM186BQ8IYM0 893 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 SLC17A8Q8NDX2 589 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 NUCKS1Q9H1E3 243 aaKnown RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 TMEM206Q9H813 350 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 PLCB1Q9NQ66 1216 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 ARHGAP20Q9P2F6 1191 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 CGNQ9P2M7 1197 aaKnown RBP11.17□□□□□ -0.62
C9orf43-201ENST00000288462 MYO1AQ9UBC5 1043 aa11.17□□□□□ -0.62
C9orf43-201ENST00000288462 SYNGAP1Q96PV0 1343 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 GTPBP10A4D1E9 387 aaKnown RBP11.16□□□□□ -0.62
C9orf43-201ENST00000288462 UNCXA6NJT0 531 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 ATG7O95352 703 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 SLU7O95391 586 aaKnown RBP11.16□□□□□ -0.62
C9orf43-201ENST00000288462 LCA5LO95447 670 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 CASQ1P31415 396 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 KRT83P78385 493 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 GTF2BQ00403 316 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 SP2Q02086 613 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 PRKCEQ02156 737 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 MIS18BP1Q6P0N0 1132 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 RRAGAQ7L523 313 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 MAEAQ7L5Y9 396 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 OTUD6AQ7L8S5 288 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 CACNA2D4Q7Z3S7 1137 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 TSC1Q92574 1164 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 HVCN1Q96D96 273 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 ACCSQ96QU6 501 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 IRX2Q9BZI1 471 aaPredicted RBP11.16□□□□□ -0.62
C9orf43-201ENST00000288462 TXNRD2Q9NNW7 524 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 RBPJLQ9UBG7 517 aa11.16□□□□□ -0.62
C9orf43-201ENST00000288462 ZNF215Q9UL58 517 aaPredicted RBP11.16□□□□□ -0.62
C9orf43-201ENST00000288462 ZNFX1Q9P2E3 1918 aaKnown RBP11.16□□□□□ -0.62
C9orf43-201ENST00000288462 PLXNB2O15031 1838 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 GRIN3BO60391 1043 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 OSBPP22059 807 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 SNRPFP62306 86 aaKnown RBP11.15□□□□□ -0.62
C9orf43-201ENST00000288462 GPR162Q16538 588 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 DCAF17Q5H9S7 520 aaPredicted RBP11.15□□□□□ -0.62
C9orf43-201ENST00000288462 SWSAP1Q6NVH7 229 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 ERO1AQ96HE7 468 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms