RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 MYBP10242 640 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 GRAPQ13588 217 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 WDR93Q6P2C0 686 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 RFX8Q6ZV50 586 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 GRAPLQ8TC17 118 aaPredicted RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 SAAL1Q96ER3 474 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 C7orf25Q9BPX7 421 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 RIOK1Q9BRS2 568 aaKnown RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 MAGED2Q9UNF1 606 aaPredicted RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 PCDHB4Q9Y5E5 795 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 MAD1L1Q9Y6D9 718 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 BRAFP15056 766 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 MAN1A1P33908 653 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 LMBRD2Q68DH5 695 aaPredicted RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 PACS2Q86VP3 889 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 RPUSD2Q8IZ73 545 aaKnown RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 KIF2BQ8N4N8 673 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 CCDC17Q96LX7 622 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 NACC1Q96RE7 527 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 PITPNM3Q9BZ71 974 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 TDRD3Q9H7E2 651 aaKnown RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 TCRBV5S4A2TA0A5A2 114 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 IL9RQ01113 521 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 ITPK1Q13572 414 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 BBS9Q3SYG4 887 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 CCDC137Q6PK04 289 aaKnown RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 ZNF354CQ86Y25 554 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 CASKIN2Q8WXE0 1202 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 DNAJC7Q99615 494 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 ALG13Q9NP73 1137 aaKnown RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 SCAF8Q9UPN6 1271 aaKnown RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 EVI5O60447 810 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 MFAP3P55082 362 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 TAF11Q15544 211 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 CHMP6Q96FZ7 201 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 DDX23Q9BUQ8 820 aaKnown RBP14.81□□□□□ -0.04
NFKB1-201ENST00000226574 CNOT8Q9UFF9 292 aaKnown RBP14.81□□□□□ -0.04
NFKB1-201ENST00000226574 LRRD1A4D1F6 860 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 F5H6K3 240 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 SPAG7O75391 227 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 RAD17O75943 681 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 PSMC4P43686 418 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 KLRC3Q07444 240 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 EPC2Q52LR7 807 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 SYCP2LQ5T4T6 812 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 DEPTORQ8TB45 409 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 ARHGEF1Q92888 912 aaKnown RBP14.81□□□□□ -0.04
NFKB1-201ENST00000226574 ZNF668Q96K58 619 aaPredicted RBP14.81□□□□□ -0.04
NFKB1-201ENST00000226574 ACTR5Q9H9F9 607 aaPredicted RBP14.81□□□□□ -0.04
NFKB1-201ENST00000226574 USP21Q9UK80 565 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 KDM6AO15550 1401 aaPredicted RBP14.81□□□□□ -0.04
NFKB1-201ENST00000226574 MROH1Q8NDA8 1641 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 CIB2O75838 187 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 PDHA1P08559 390 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 C6orf118Q5T5N4 469 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 ARHGEF16Q5VV41 709 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 CLEC4GQ6UXB4 293 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.81□□□□□ -0.04
NFKB1-201ENST00000226574 SLC35G2Q8TBE7 412 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 CEP170P1Q96L14 293 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 C9orf72Q96LT7 481 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 PRMT1Q99873 361 aaKnown RBP14.81□□□□□ -0.04
NFKB1-201ENST00000226574 NUDT12Q9BQG2 462 aa14.81□□□□□ -0.04
NFKB1-201ENST00000226574 MRPL11Q9Y3B7 192 aaKnown RBP14.81□□□□□ -0.04
NFKB1-201ENST00000226574 RASA4BC9J798 803 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 RASA4O43374 803 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 CAMTA2O94983 1202 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 DMP1Q13316 513 aaPredicted RBP14.8□□□□□ -0.04
NFKB1-201ENST00000226574 PPP2R5CQ13362 524 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 LONRF1Q17RB8 773 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 NBPF9Q3BBW0 867 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 C2CD6Q53TS8 623 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 SYDE2Q5VT97 1194 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 METTL13Q8N6R0 699 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 TSEN2Q8NCE0 465 aaKnown RBP14.8□□□□□ -0.04
NFKB1-201ENST00000226574 ERGIC2Q96RQ1 377 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 REEP2Q9BRK0 252 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 CNOT10Q9H9A5 744 aaKnown RBP14.8□□□□□ -0.04
NFKB1-201ENST00000226574 NXF1Q9UBU9 619 aaKnown RBP14.8□□□□□ -0.04
NFKB1-201ENST00000226574 RAB21Q9UL25 225 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 RSPH10B2B2RC85 870 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 SLC16A4O15374 487 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 RSPH10BP0C881 870 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 PAPD7Q5XG87 772 aaKnown RBP14.8□□□□□ -0.04
NFKB1-201ENST00000226574 TMEM139Q8IV31 216 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 ZNF512BQ96KM6 892 aaPredicted RBP14.8□□□□□ -0.04
NFKB1-201ENST00000226574 PPLO60437 1756 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 A0A0G2JND7 137 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 EPHB6O15197 1021 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 TAL1P17542 331 aaPredicted RBP14.8□□□□□ -0.04
NFKB1-201ENST00000226574 SAT1P21673 171 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 RWDD2BP57060 319 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 BASP1P80723 227 aaKnown RBP14.8□□□□□ -0.04
NFKB1-201ENST00000226574 SEPT14Q6ZU15 432 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 EEPD1Q7L9B9 569 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 HIPK4Q8NE63 616 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 TSNARE1Q96NA8 513 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 CALN1Q9BXU9 219 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 ETNK1Q9HBU6 452 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms