RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ASAP2O43150 1006 aa15.58■□□□□ 0.09
SPTLC2-201ENST00000216484 SERPIND1P05546 499 aa15.58■□□□□ 0.09
SPTLC2-201ENST00000216484 CAPRIN2Q6IMN6 1127 aaKnown RBP15.58■□□□□ 0.09
SPTLC2-201ENST00000216484 C16orf72Q14CZ0 275 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 SMYD4Q8IYR2 804 aaPredicted RBP15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 ELMOD1Q8N336 334 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 ITSN2Q9NZM3 1697 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 GTPBP6O43824 516 aaPredicted RBP15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 DDX5P17844 614 aaKnown RBP15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 NUP93Q8N1F7 819 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 NHEJ1Q9H9Q4 299 aaPredicted RBP15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 PPIP5K1Q6PFW1 1433 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 STAG2Q8N3U4 1231 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 UBE4BO95155 1302 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 PHLPP2Q6ZVD8 1323 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 ANKS3Q6ZW76 656 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 ARMCX2Q7L311 632 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 SLC7A3Q8WY07 619 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 CENPTQ96BT3 561 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 PRDM5Q9NQX1 630 aaPredicted RBP15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 LMBRD1Q9NUN5 540 aa15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 ARPP21Q9UBL0 812 aaPredicted RBP15.58■□□□□ 0.08
SPTLC2-201ENST00000216484 TCHHQ07283 1943 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 PABPC4Q13310 644 aaKnown RBP eCLIP15.57■□□□□ 0.083e-8■■□□□ 11.4
SPTLC2-201ENST00000216484 ACCSLQ4AC99 568 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 RAD18Q9NS91 495 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 AIPL1Q9NZN9 384 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 OR6B2Q6IFH4 312 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 CATSPER1Q8NEC5 780 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 RPAP3Q9H6T3 665 aaPredicted RBP15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 SOS2Q07890 1332 aaPredicted RBP15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 MFN1Q8IWA4 741 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 LSG1Q9H089 658 aaKnown RBP15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 CACNA2D2Q9NY47 1150 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 ZMYM6O95789 1325 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 PPARAQ07869 468 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 MAPRE1Q15691 268 aaKnown RBP15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 TTC23LQ6PF05 361 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 MAGEB5Q9BZ81 275 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 MPP6Q9NZW5 540 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 MYO1GB0I1T2 1018 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 C5orf58C9J3I9 102 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 ME3Q16798 604 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 COG1Q8WTW3 980 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 EXOC4Q96A65 974 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 SMARCAD1Q9H4L7 1026 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 SCAF11Q99590 1463 aaKnown RBP15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 ARHGEF37A1IGU5 675 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 SOWAHDA6NJG2 315 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 TNFAIP1Q13829 316 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 FAM26FQ5R3K3 315 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 PRG4Q92954 1404 aaPredicted RBP15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 UBA6A0AVT1 1052 aaPredicted RBP15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 KLRF2D3W0D1 207 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 MYCP01106 439 aaPredicted RBP15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 APOA4P06727 396 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 LRRC36Q1X8D7 754 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 TMEM63CQ9P1W3 806 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 PCDHA13Q9Y5I0 950 aa15.57■□□□□ 0.08
SPTLC2-201ENST00000216484 PPIP5K2O43314 1243 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 MFSD14BQ5SR56 506 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 PPP1R2P3Q6NXS1 205 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 TGS1Q96RS0 853 aaKnown RBP15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 LRRC53A6NM62 1247 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 FOSL2P15408 326 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 ELMSAN1Q6PJG2 1045 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 HORMAD1Q86X24 394 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 ARL8AQ96BM9 186 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.56■□□□□ 0.088e-7■■■■■ 32.7
SPTLC2-201ENST00000216484 BBS2Q9BXC9 721 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 MROH5Q6ZUA9 1318 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 CCDC151A5D8V7 595 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 SERPING1P05155 500 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 SLC16A1P53985 500 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 LPIN2Q92539 896 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 EFCAB5A4FU69 1503 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 KRT39Q6A163 491 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 TRIM54Q9BYV2 358 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 GPBP1L1Q9HC44 474 aaPredicted RBP15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 MAP3K15Q6ZN16 1313 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 CLK1P49759 484 aaKnown RBP15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 CASP8Q14790 479 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 AFG1LQ8WV93 481 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 TADA1Q96BN2 335 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 RPF1Q9H9Y2 349 aaKnown RBP15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 ANKRD65E5RJM6 399 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 RGS5O15539 181 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 PSMD7P51665 324 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 MDH1BQ5I0G3 518 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 CENPPQ6IPU0 288 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 ACCSQ96QU6 501 aa15.56■□□□□ 0.08
SPTLC2-201ENST00000216484 TCP10L2B9ZVM9 353 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 MARK3P27448 753 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 SMAD1Q15797 465 aaKnown RBP15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 SDR42E1Q8WUS8 393 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 NACC1Q96RE7 527 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 SEPT3Q9UH03 358 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 PODXLO00592 558 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 CHUKO15111 745 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 ACTN3Q08043 901 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms