RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 TMC3Q7Z5M5 1100 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 CPNE8Q86YQ8 564 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 CCDC105Q8IYK2 499 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 GCKP35557 465 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 ZNF76P36508 570 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 CACNB3P54284 484 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 ITIH3Q06033 890 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 SLC35G2Q8TBE7 412 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 RIC8AQ9NPQ8 531 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 SLC12A6Q9UHW9 1150 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 ECHS1P30084 290 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 MARCKSL1P49006 195 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 GSTO1P78417 241 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 NUGGCQ68CJ6 796 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 SPATS2Q86XZ4 545 aaKnown RBP18.17■□□□□ 0.5
CTDP1-201ENST00000075430 BHMT2Q9H2M3 363 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 PSTPIP2Q9H939 334 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 FGFR1OP2Q9NVK5 253 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 RGL1Q9NZL6 768 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 RNF14Q9UBS8 474 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 STK17AQ9UEE5 414 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 GGA1Q9UJY5 639 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 PCDHGC5Q9Y5F6 944 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 F8VZ95 297 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 AKAP3O75969 853 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 GPSM2P81274 684 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 PALB2Q86YC2 1186 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 DNAJC19Q96DA6 116 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 LAMB4A4D0S4 1761 aa18.17■□□□□ 0.5
CTDP1-201ENST00000075430 AFPP02771 609 aaKnown RBP18.16■□□□□ 0.5
CTDP1-201ENST00000075430 HOXA13P31271 388 aaPredicted RBP18.16■□□□□ 0.5
CTDP1-201ENST00000075430 SPICE1Q8N0Z3 855 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 PCIF1Q9H4Z3 704 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 GLI3P10071 1580 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 H0Y3Z8 333 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 PPP1R2P41236 205 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 SSR1P43307 286 aaKnown RBP18.16■□□□□ 0.5
CTDP1-201ENST00000075430 CUL1Q13616 776 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 SHROOM1Q2M3G4 852 aaPredicted RBP18.16■□□□□ 0.5
CTDP1-201ENST00000075430 TRIM59Q8IWR1 403 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 PWWP2AQ96N64 755 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 MED24O75448 989 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 AKR1B1P15121 316 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 TNFAIP3P21580 790 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 PON1P27169 355 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 STAT1P42224 750 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 MTM1Q13496 603 aa18.16■□□□□ 0.5
CTDP1-201ENST00000075430 TAB3Q8N5C8 712 aaPredicted RBP18.16■□□□□ 0.5
CTDP1-201ENST00000075430 IGSF9BQ9UPX0 1349 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 UBOX5O94941 541 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 NMT1P30419 496 aaKnown RBP18.15■□□□□ 0.5
CTDP1-201ENST00000075430 COG2Q14746 738 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 IFI16Q16666 785 aaKnown RBP18.15■□□□□ 0.5
CTDP1-201ENST00000075430 ARHGEF26Q96DR7 871 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 MAGEF1Q9HAY2 307 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 ZNF287Q9HBT7 754 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 CTNNAL1Q9UBT7 734 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 DDX3XO00571 662 aaKnown RBP eCLIP18.15■□□□□ 0.55e-7■■■■■ 38.1
CTDP1-201ENST00000075430 EVI5O60447 810 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 PMS2P54278 862 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 TEX2Q8IWB9 1127 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 SPDL1Q96EA4 605 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 RSRC1Q96IZ7 334 aaKnown RBP18.15■□□□□ 0.5
CTDP1-201ENST00000075430 DONSONQ9NYP3 566 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 A0A1B0GUA9 196 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 CCT8L1PA6NM43 557 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 H0YGN5 161 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 TBCAO75347 108 aaKnown RBP18.15■□□□□ 0.5
CTDP1-201ENST00000075430 PCP11498 1178 aaKnown RBP18.15■□□□□ 0.5
CTDP1-201ENST00000075430 PREPLQ4J6C6 727 aaPredicted RBP18.15■□□□□ 0.5
CTDP1-201ENST00000075430 IRF2BP2Q7Z5L9 587 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 MYCT1Q8N699 235 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 HAS1Q92839 578 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 TATDN2Q93075 761 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 NFS1Q9Y697 457 aa18.15■□□□□ 0.5
CTDP1-201ENST00000075430 GOLGA6L10A0A0M3HER8 536 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 TCP11X1B4DZS4 312 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 ELF3P78545 371 aaPredicted RBP18.14■□□□□ 0.49
CTDP1-201ENST00000075430 RNASELQ05823 741 aaKnown RBP18.14■□□□□ 0.49
CTDP1-201ENST00000075430 C2CD6Q53TS8 623 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 TPH2Q8IWU9 490 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 NEK9Q8TD19 979 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 MIEF2Q96C03 454 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 KLHL29Q96CT2 875 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 PBKQ96KB5 322 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 THAP2Q9H0W7 228 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 ACTR5Q9H9F9 607 aaPredicted RBP18.14■□□□□ 0.49
CTDP1-201ENST00000075430 CD209Q9NNX6 404 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 PNMA3Q9UL41 463 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 DDX39AO00148 427 aaKnown RBP18.14■□□□□ 0.49
CTDP1-201ENST00000075430 LCA5LO95447 670 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 DRD4P21917 467 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 CTTNQ14247 550 aaKnown RBP18.14■□□□□ 0.49
CTDP1-201ENST00000075430 ADGRF4Q8IZF3 695 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 CYP2W1Q8TAV3 490 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 MTMR9Q96QG7 549 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 TMX4Q9H1E5 349 aaPredicted RBP18.14■□□□□ 0.49
CTDP1-201ENST00000075430 MCM8Q9UJA3 840 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 ZBTB21Q9ULJ3 1066 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 GSTTP1A0A1W2PQM5 241 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms