RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 ZMAT2Q96NC0 199 aaKnown RBP8.55□□□□□ -1.04
CDKL5-211ENST00000637881 CCDC85AQ96PX6 553 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-211ENST00000637881 NUP88Q99567 741 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-211ENST00000637881 ISCA1Q9BUE6 129 aa8.55□□□□□ -1.04
CDKL5-211ENST00000637881 RXFP1Q9HBX9 757 aa8.55□□□□□ -1.04
CDKL5-211ENST00000637881 TIMMDC1Q9NPL8 285 aa8.55□□□□□ -1.04
CDKL5-211ENST00000637881 HESX1Q9UBX0 185 aa8.55□□□□□ -1.04
CDKL5-211ENST00000637881 NFU1Q9UMS0 254 aa8.55□□□□□ -1.04
CDKL5-211ENST00000637881 EFR3BQ9Y2G0 817 aa8.55□□□□□ -1.04
CDKL5-211ENST00000637881 USP15Q9Y4E8 981 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-211ENST00000637881 NR2E3Q9Y5X4 410 aa8.55□□□□□ -1.04
CDKL5-211ENST00000637881 SMIM31A0A1B0GVY4 71 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 A0A1W2PQC6 194 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 TRIM43BA6NCK2 446 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 BHMG1C9JSJ3 638 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-211ENST00000637881 SH2B2O14492 632 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-211ENST00000637881 ZNF185O15231 689 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 HNRNPRO43390 633 aaKnown RBP8.54□□□□□ -1.04
CDKL5-211ENST00000637881 CTNND1O60716 968 aaKnown RBP8.54□□□□□ -1.04
CDKL5-211ENST00000637881 GJB6O95452 261 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 PDGFRBP09619 1106 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 S100A1P23297 94 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 TM4SF1P30408 202 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 HSD17B3P37058 310 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 CARSP49589 748 aaKnown RBP8.54□□□□□ -1.04
CDKL5-211ENST00000637881 ERFEQ4G0M1 354 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 CFAP221Q4G0U5 840 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 LIN52Q52LA3 116 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 PDCD4Q53EL6 469 aaKnown RBP8.54□□□□□ -1.04
CDKL5-211ENST00000637881 SLC9C2Q5TAH2 1124 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 SOGA3Q5TF21 947 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 TPTE2Q6XPS3 522 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 DHX32Q7L7V1 743 aaKnown RBP8.54□□□□□ -1.04
CDKL5-211ENST00000637881 LRRC49Q8IUZ0 686 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 CLASRPQ8N2M8 674 aaKnown RBP8.54□□□□□ -1.04
CDKL5-211ENST00000637881 SLC16A10Q8TF71 515 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 ATXN2LQ8WWM7 1075 aaKnown RBP8.54□□□□□ -1.04
CDKL5-211ENST00000637881 INPP5DQ92835 1189 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 TCEANC2Q96MN5 208 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 ISCUQ9H1K1 167 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 LRMDAQ9H2I8 198 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 DCLRE1BQ9H816 532 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 ABCF3Q9NUQ8 709 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 PTTG2Q9NZH5 202 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 HSFX1Q9UBD0 423 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 TRIM10Q9UDY6 481 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 CNOT8Q9UFF9 292 aaKnown RBP8.54□□□□□ -1.04
CDKL5-211ENST00000637881 KCNH3Q9ULD8 1083 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.54□□□□□ -1.04
CDKL5-211ENST00000637881 ZNF831Q5JPB2 1677 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 MYPNQ86TC9 1320 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 RREB1Q92766 1687 aa8.54□□□□□ -1.04
CDKL5-211ENST00000637881 SIGLEC16A6NMB1 481 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 SNX3O60493 162 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 GNA14O95837 355 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 FAM153BP0C7A2 387 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 MYBL1P10243 752 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 VARSP26640 1264 aaKnown RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 FLT3P36888 993 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 GEMIN4P57678 1058 aaKnown RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 FAM153CQ494X1 144 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 SPDYAQ5MJ70 313 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 NANOGNBQ7Z5D8 188 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 PASD1Q8IV76 773 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 FOXP4Q8IVH2 680 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 SYT2Q8N9I0 419 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 RBM46Q8TBY0 533 aaKnown RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 TRPC4APQ8TEL6 797 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 HNRNPABQ99729 332 aaKnown RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 MTFR1LQ9H019 292 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 DDX43Q9NXZ2 648 aaKnown RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 FAM153AQ9UHL3 310 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 INTUQ9ULD6 942 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 UBR3Q6ZT12 1888 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 A8MUI8 341 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 GRM8O00222 908 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 POLRMTO00411 1230 aaKnown RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 CES2O00748 559 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 IRS4O14654 1257 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 SUPT3HO75486 399 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 TAF5LO75529 589 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 MMEP08473 750 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 PABPC4LP0CB38 370 aaKnown RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 CTNNA1P35221 906 aaKnown RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 PTDSS1P48651 473 aaKnown RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 CDK7P50613 346 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 ADARP55265 1226 aaKnown RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 TNNC1P63316 161 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 KIF23Q02241 960 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 GUCY2DQ02846 1103 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 CYLC2Q14093 348 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 PTPAQ15257 358 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 LONRF3Q496Y0 759 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 PARP10Q53GL7 1025 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 TTC39AQ5SRH9 613 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 SYDE2Q5VT97 1194 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 GRAMD4Q6IC98 578 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 CCDC174Q6PII3 467 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms