RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 KCNT2Q6UVM3 1135 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 LRSAM1Q6UWE0 723 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 ZNF662Q6ZS27 426 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 RD3Q7Z3Z2 195 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 FAM178BQ8IXR5 827 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 GSPT2Q8IYD1 628 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 ZNF654Q8IZM8 581 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 SYNE4Q8N205 404 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 ZNF276Q8N554 614 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 BEND2Q8NDZ0 799 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 WDR48Q8TAF3 677 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 KCTD13Q8WZ19 329 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 SPATA32Q96LK8 384 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 IER2Q9BTL4 223 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 GPR87Q9BY21 358 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 RSAD1Q9HA92 442 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 INCENPQ9NQS7 918 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 FBXO10Q9UK96 956 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 SPATA31A6Q5VVP1 1343 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 A0A0G2JNJ9 132 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 BLACEA4D250 179 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 GRID2IPA4D2P6 1211 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 PRAMEF25A6NGN4 478 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 FAM90A27PA6NNH2 459 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 INO80B-WBP1J3KQ70 363 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 TRAF5O00463 557 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 DDAH1O94760 285 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 ABHD16AO95870 558 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 SOD2P04179 222 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 PTPN1P18031 435 aaKnown RBP1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 KRT15P19012 456 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 RBM25P49756 843 aaKnown RBP1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 PPP2R2AP63151 447 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 ATP2C1P98194 919 aaPredicted RBP1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 MAP4K2Q12851 820 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 ADAM15Q13444 863 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 KIZQ2M2Z5 673 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 LY6G5CQ5SRR4 150 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 TRIM68Q6AZZ1 485 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 MRM1Q6IN84 353 aaKnown RBP1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 OLFML1Q6UWY5 402 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 LBX2Q6XYB7 198 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 EP400NLQ6ZTU2 488 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 ELOA2Q8IYF1 753 aaPredicted RBP1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 MB21D1Q8N884 522 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 SH3RF2Q8TEC5 729 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 MIEF2Q96C03 454 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 MRRFQ96E11 262 aaKnown RBP1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 MPHOSPH9Q99550 1183 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 INO80BQ9C086 356 aaPredicted RBP1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 R3HDMLQ9H3Y0 253 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 IPPKQ9H8X2 491 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 SYNPO2LQ9H987 977 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 MSL2Q9HCI7 577 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 UCKL1Q9NWZ5 548 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 GALNT8Q9NY28 637 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 Q9UFV3 132 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 SCRIBQ14160 1630 aa1.8□□□□□ -2.12
SMARCB1-209ENST00000635578 TCRBV5S4A2TA0A5A2 114 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 GOLGA8BA8MQT2 603 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 FAM47E-STBD1D6RA91 191 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 KCNK3O14649 394 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 SMAD7O15105 426 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 B3GALT2O43825 422 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 DLX3O60479 287 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 ZNF16P17020 682 aaPredicted RBP1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 CLK3P49761 638 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 KRTAP10-7P60409 375 aaPredicted RBP1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 MOGSQ13724 837 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 RABL3Q5HYI8 236 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 HABP4Q5JVS0 413 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 KANK2Q63ZY3 851 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 ARHGAP36Q6ZRI8 547 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 CXXC5Q7LFL8 322 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 PTRH1Q86Y79 214 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 CPT1CQ8TCG5 803 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 ATXN2LQ8WWM7 1075 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 RABGGTAQ92696 567 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 LENG9Q96B70 501 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 RPL10LQ96L21 214 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 CYP4F11Q9HBI6 524 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 METTL5Q9NRN9 209 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 ACTR10Q9NZ32 417 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 RNF7Q9UBF6 113 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 TESQ9UGI8 421 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 SRPK3Q9UPE1 567 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 MRVI1Q9Y6F6 885 aa1.79□□□□□ -2.12
SMARCB1-209ENST00000635578 KIF21AQ7Z4S6 1674 aa1.78□□□□□ -2.12
SMARCB1-209ENST00000635578 BICRAQ9NZM4 1560 aa1.78□□□□□ -2.12
SMARCB1-209ENST00000635578 XDHP47989 1333 aa1.78□□□□□ -2.12
SMARCB1-209ENST00000635578 UBE2QL1A1L167 161 aa1.78□□□□□ -2.12
SMARCB1-209ENST00000635578 KLRG2A4D1S0 409 aaPredicted RBP1.78□□□□□ -2.12
SMARCB1-209ENST00000635578 AGRPO00253 132 aa1.78□□□□□ -2.12
SMARCB1-209ENST00000635578 MAN2B1O00754 1011 aa1.78□□□□□ -2.12
SMARCB1-209ENST00000635578 PRODHO43272 600 aa1.78□□□□□ -2.12
SMARCB1-209ENST00000635578 ITGB1P05556 798 aa1.78□□□□□ -2.12
SMARCB1-209ENST00000635578 MMEP08473 750 aa1.78□□□□□ -2.12
SMARCB1-209ENST00000635578 NR4A1P22736 598 aa1.78□□□□□ -2.12
SMARCB1-209ENST00000635578 AOAHP28039 575 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms