RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 ATP2C2O75185 946 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 MYZAPP0CAP1 466 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 PLCG2P16885 1265 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 CTNNA1P35221 906 aaKnown RBP11.32□□□□□ -0.6
TP53-225ENST00000619485 ECE1P42892 770 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 NOVP48745 357 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 COBLL1Q53SF7 1204 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 KCNV1Q6PIU1 500 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 KDM7AQ6ZMT4 941 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 GPBP1Q86WP2 473 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 CCT8L2Q96SF2 557 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 GLIS2Q9BZE0 524 aaPredicted RBP11.32□□□□□ -0.6
TP53-225ENST00000619485 TRIM31Q9BZY9 425 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 DDX47Q9H0S4 455 aaKnown RBP11.32□□□□□ -0.6
TP53-225ENST00000619485 STK32BQ9NY57 414 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 PCDHA12Q9UN75 941 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 FZD1Q9UP38 647 aa11.32□□□□□ -0.6
TP53-225ENST00000619485 MYH7BA7E2Y1 1941 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 USP17L15C9J2P7 530 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 USP17L13C9JLJ4 530 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 USP17L11C9JVI0 530 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 USP17L18D6R9N7 530 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 USP17L22D6RA61 530 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 USP17L17D6RBQ6 530 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 USP17L19D6RCP7 530 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 USP17L20D6RJB6 530 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 MEFVO15553 781 aaPredicted RBP11.31□□□□□ -0.6
TP53-225ENST00000619485 TNFRSF8P28908 595 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 SETQ01105 290 aaPredicted RBP11.31□□□□□ -0.6
TP53-225ENST00000619485 PTK2Q05397 1052 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 USP17L24Q0WX57 530 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 CDC37Q16543 378 aaPredicted RBP11.31□□□□□ -0.6
TP53-225ENST00000619485 PTGISQ16647 500 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 USP17L6PQ6QN14 398 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 NLRP14Q86W24 1093 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 USP38Q8NB14 1042 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 RNF14Q9UBS8 474 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 PPP1R1BQ9UD71 204 aaPredicted RBP11.31□□□□□ -0.6
TP53-225ENST00000619485 SLC9A1P19634 815 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 NR2F2P24468 414 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 TMOD1P28289 359 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 STAT3P40763 770 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 MDH1P40925 334 aaKnown RBP11.31□□□□□ -0.6
TP53-225ENST00000619485 ERVK-9P63128 1117 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 ZNF543Q08ER8 600 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 KCNH2Q12809 1159 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 STYK1Q6J9G0 422 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 MICALCLQ6ZW33 695 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 MIGA2Q7L4E1 593 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 ADAT2Q7Z6V5 191 aaKnown RBP11.31□□□□□ -0.6
TP53-225ENST00000619485 KCTD17Q8N5Z5 321 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 ACER1Q8TDN7 264 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 DNAJC19Q96DA6 116 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 INPP4AQ96PE3 977 aaPredicted RBP11.31□□□□□ -0.6
TP53-225ENST00000619485 LRRC27Q9C0I9 530 aa11.31□□□□□ -0.6
TP53-225ENST00000619485 NUCKS1Q9H1E3 243 aaKnown RBP11.31□□□□□ -0.6
TP53-225ENST00000619485 TAF1DQ9H5J8 278 aaPredicted RBP11.31□□□□□ -0.6
TP53-225ENST00000619485 ARFGEF1Q9Y6D6 1849 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 ABCB11O95342 1321 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 RBAK-RBAKDNI3L0D1 243 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 CCDC172P0C7W6 258 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 HSD17B3P37058 310 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 PSMD2Q13200 908 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 ZYXQ15942 572 aaKnown RBP11.3□□□□□ -0.6
TP53-225ENST00000619485 HHIPL2Q6UWX4 724 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 MYCBPAPQ8TBZ2 947 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 WHAMMQ8TF30 809 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 RIOX1Q9H6W3 641 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 EMILIN3Q9NT22 766 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 AMACRQ9UHK6 382 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 MEIS1O00470 390 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 KRIT1O00522 736 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 GH2P01242 217 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 PLA2G4BP0C869 781 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 SNHG28P0DPA3 235 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 STRIP1Q5VSL9 837 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 PODNQ7Z5L7 613 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 SUGP1Q8IWZ8 645 aaKnown RBP11.3□□□□□ -0.6
TP53-225ENST00000619485 TMEM39BQ9GZU3 492 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 DPH5Q9H2P9 285 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 BCAS3Q9H6U6 928 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 HDAC9Q9UKV0 1011 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 PCDHGC5Q9Y5F6 944 aa11.3□□□□□ -0.6
TP53-225ENST00000619485 PLIN4Q96Q06 1357 aa11.29□□□□□ -0.6
TP53-225ENST00000619485 A6NNZ2 444 aa11.29□□□□□ -0.6
TP53-225ENST00000619485 HMGB1P1B2RPK0 211 aaPredicted RBP11.29□□□□□ -0.6
TP53-225ENST00000619485 TTLL1O95922 423 aa11.29□□□□□ -0.6
TP53-225ENST00000619485 FLT3P36888 993 aa11.29□□□□□ -0.6
TP53-225ENST00000619485 USP8P40818 1118 aa11.29□□□□□ -0.6
TP53-225ENST00000619485 PRELPP51888 382 aa11.29□□□□□ -0.6
TP53-225ENST00000619485 ITGB3BPQ13352 177 aaPredicted RBP11.29□□□□□ -0.6
TP53-225ENST00000619485 SF3B2Q13435 895 aaKnown RBP11.29□□□□□ -0.6
TP53-225ENST00000619485 PRPF4BQ13523 1007 aaKnown RBP11.29□□□□□ -0.6
TP53-225ENST00000619485 PDIA5Q14554 519 aa11.29□□□□□ -0.6
TP53-225ENST00000619485 TUBB8Q3ZCM7 444 aa11.29□□□□□ -0.6
TP53-225ENST00000619485 TMEM119Q4V9L6 283 aa11.29□□□□□ -0.6
TP53-225ENST00000619485 ZCWPW2Q504Y3 356 aa11.29□□□□□ -0.6
TP53-225ENST00000619485 ZNF571Q7Z3V5 609 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms