RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 DPY19L2Q6NUT2 758 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 NEK11Q8NG66 645 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 BTBD7Q9P203 1132 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 LOC285556D6RIA3 1793 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 USO1O60763 962 aaKnown RBP19.08■□□□□ 0.65
PCDHGC3-205ENST00000617641 AKAP3O75969 853 aa19.08■□□□□ 0.65
PCDHGC3-205ENST00000617641 CASQ1P31415 396 aa19.08■□□□□ 0.65
PCDHGC3-205ENST00000617641 SFNP31947 248 aa19.08■□□□□ 0.65
PCDHGC3-205ENST00000617641 CASP4P49662 377 aa19.08■□□□□ 0.65
PCDHGC3-205ENST00000617641 UTP14CQ5TAP6 766 aaKnown RBP19.08■□□□□ 0.65
PCDHGC3-205ENST00000617641 LBX2Q6XYB7 198 aa19.08■□□□□ 0.65
PCDHGC3-205ENST00000617641 CRACR2AQ9BSW2 395 aa19.08■□□□□ 0.65
PCDHGC3-205ENST00000617641 ARMCX3Q9UH62 379 aaPredicted RBP19.08■□□□□ 0.65
PCDHGC3-205ENST00000617641 FAM184BQ9ULE4 1060 aa19.08■□□□□ 0.65
PCDHGC3-205ENST00000617641 EPHX2P34913 555 aa19.08■□□□□ 0.64
PCDHGC3-205ENST00000617641 TTLL12Q14166 644 aaPredicted RBP19.08■□□□□ 0.64
PCDHGC3-205ENST00000617641 NAA30Q147X3 362 aaPredicted RBP19.08■□□□□ 0.64
PCDHGC3-205ENST00000617641 ARHGAP29Q52LW3 1261 aa19.08■□□□□ 0.64
PCDHGC3-205ENST00000617641 FRMD5Q7Z6J6 570 aa19.08■□□□□ 0.64
PCDHGC3-205ENST00000617641 C4orf19Q8IY42 314 aa19.08■□□□□ 0.64
PCDHGC3-205ENST00000617641 L3MBTL3Q96JM7 780 aaPredicted RBP19.08■□□□□ 0.64
PCDHGC3-205ENST00000617641 NHEJ1Q9H9Q4 299 aaPredicted RBP19.08■□□□□ 0.64
PCDHGC3-205ENST00000617641 BACH1O14867 736 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 URI1O94763 535 aaPredicted RBP19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 KCNA2P16389 499 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 RPL13P26373 211 aaKnown RBP19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 ARHGAP25P42331 645 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 PSMC5P62195 406 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 KCNH2Q12809 1159 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 USP50Q70EL3 339 aaPredicted RBP19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 RRAGAQ7L523 313 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 GPIHBP1Q8IV16 184 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 BAP1Q92560 729 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 CCDC43Q96MW1 224 aaKnown RBP19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 LSM14BQ9BX40 385 aaKnown RBP19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 TELO2Q9Y4R8 837 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 A0A0G2JLL6 359 aaPredicted RBP19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 CNTN2Q02246 1040 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 PPATQ06203 517 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 PLA2G4FQ68DD2 849 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 ZNF746Q6NUN9 644 aaPredicted RBP19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 PRRT2Q7Z6L0 340 aaPredicted RBP19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 ZNF710Q8N1W2 664 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 CHST13Q8NET6 341 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 MOV10L1Q9BXT6 1211 aaKnown RBP19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 PLAGL2Q9UPG8 496 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 A0A0G2JMZ2 1700 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 DOCK5Q9H7D0 1870 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 UBE4BO95155 1302 aa19.07■□□□□ 0.64
PCDHGC3-205ENST00000617641 LRRC53A6NM62 1247 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 MAFGO15525 162 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 KIF5CO60282 957 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 NOL4O94818 638 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 SLU7O95391 586 aaKnown RBP19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 PLEKP08567 350 aaPredicted RBP19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 NF2P35240 595 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 HERVK_113P62684 666 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 APBA1Q02410 837 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 STXBP4Q6ZWJ1 553 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 ERO1BQ86YB8 467 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 ANKRD13AQ8IZ07 590 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 ANKRD35Q8N283 1001 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 SORBS3O60504 671 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 EPB41P11171 864 aaKnown RBP19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 HNRNPH3P31942 346 aaKnown RBP19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 CACNA2D4Q7Z3S7 1137 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 PROCA1Q8NCQ7 364 aaPredicted RBP19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 SENP7Q9BQF6 1050 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 NLRC4Q9NPP4 1024 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 PCDHB13Q9Y5F0 798 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 PCDHA10Q9Y5I2 948 aa19.06■□□□□ 0.64
PCDHGC3-205ENST00000617641 K7ENM7 598 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 SLC16A3O15427 465 aaKnown RBP19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 PPP1R37O75864 691 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 CYLC1P35663 651 aaPredicted RBP19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 NPEPPSP55786 919 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 CDK17Q00537 523 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 SP4Q02446 784 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 NCBP1Q09161 790 aaKnown RBP19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 FSTL1Q12841 308 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 DCAF17Q5H9S7 520 aaPredicted RBP19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 LRRN4CLQ8ND94 238 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 RDM1Q8NG50 284 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 STRA6Q9BX79 667 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 TRIM10Q9UDY6 481 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 TFR2Q9UP52 801 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 XRCC5P13010 732 aaKnown RBP19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 IRX3P78415 501 aaPredicted RBP19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 XKR9Q5GH70 373 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 ZNF569Q5MCW4 686 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 PDXDC1Q6P996 788 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 RIOX2Q8IUF8 465 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 CCDC170Q8IYT3 715 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 PAGR1Q9BTK6 254 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 ARHGAP20Q9P2F6 1191 aa19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 V9GYY5 206 aaPredicted RBP19.05■□□□□ 0.64
PCDHGC3-205ENST00000617641 SPDYE5A6NIY4 337 aa19.04■□□□□ 0.64
PCDHGC3-205ENST00000617641 AFPP02771 609 aaKnown RBP19.04■□□□□ 0.64
PCDHGC3-205ENST00000617641 EAPPQ56P03 285 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms