RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 TMOD1P28289 359 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 COL9A3Q14050 684 aaPredicted RBP13.42□□□□□ -0.26
CDH1-212ENST00000611625 CDKAL1Q5VV42 579 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 TFR2Q9UP52 801 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 TMEM191BP0C7N4 346 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 RASA1P20936 1047 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 FGFR2P21802 821 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 USP11P51784 963 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 MAGOHP61326 146 aaKnown RBP13.42□□□□□ -0.26
CDH1-212ENST00000611625 DRAP1Q14919 205 aaPredicted RBP13.42□□□□□ -0.26
CDH1-212ENST00000611625 SEC23AQ15436 765 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 TRIP13Q15645 432 aaPredicted RBP13.42□□□□□ -0.26
CDH1-212ENST00000611625 FAM133BQ5BKY9 247 aaKnown RBP13.42□□□□□ -0.26
CDH1-212ENST00000611625 BEND6Q5SZJ8 279 aaPredicted RBP13.42□□□□□ -0.26
CDH1-212ENST00000611625 ZNF354CQ86Y25 554 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 ERGIC2Q96RQ1 377 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 A0A1W2PQJ5 194 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 CRKP46108 304 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 GPSM2P81274 684 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 MS4A14Q96JA4 679 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 SLITRK6Q9H5Y7 841 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 ACSL3O95573 720 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 TNNC2P02585 160 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 MMEP08473 750 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 TMED2Q15363 201 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 FRMD5Q7Z6J6 570 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 AS3MTQ9HBK9 375 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 MTMR4Q9NYA4 1195 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 TBK1Q9UHD2 729 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 P4HA1P13674 534 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
CDH1-212ENST00000611625 RASA3Q14644 834 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 RCSD1Q6JBY9 416 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 TRIM65Q6PJ69 517 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 FAM160B2Q86V87 743 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 GLYCTKQ8IVS8 523 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 RILPQ96NA2 401 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 MRPL47Q9HD33 250 aaKnown RBP13.41□□□□□ -0.26
CDH1-212ENST00000611625 RNF8O76064 485 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 PRELPP51888 382 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 PPP2R2AP63151 447 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 PRKG1Q13976 671 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 ICE2Q659A1 982 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 LRRN4CLQ8ND94 238 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 JPH2Q9BR39 696 aaPredicted RBP13.41□□□□□ -0.26
CDH1-212ENST00000611625 GMNCA6NCL1 334 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 NPR1P16066 1061 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 POLD1P28340 1107 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 GCLMP48507 274 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 DYDC2Q96IM9 177 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 FLT1P17948 1338 aa13.41□□□□□ -0.26
CDH1-212ENST00000611625 SGK1O00141 431 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 GPC5P78333 572 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 PPP2R5AQ15172 486 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 MAP7D1Q3KQU3 841 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 TTBK2Q6IQ55 1244 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 PHLDB2Q86SQ0 1253 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 NLRP14Q86W24 1093 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 XXYLT1Q8NBI6 393 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 RFFLQ8WZ73 363 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 DNAJC17Q9NVM6 304 aaKnown RBP13.4□□□□□ -0.26
CDH1-212ENST00000611625 SMARCAL1Q9NZC9 954 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 DAPK3O43293 454 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 PEX3P56589 373 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 ZNF543Q08ER8 600 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 KRT81Q14533 505 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 BRDTQ58F21 947 aaPredicted RBP13.4□□□□□ -0.26
CDH1-212ENST00000611625 SH2D3CQ8N5H7 860 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 DNAJC7Q99615 494 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 RIOK1Q9BRS2 568 aaKnown RBP13.4□□□□□ -0.26
CDH1-212ENST00000611625 RBM12Q9NTZ6 932 aaKnown RBP13.4□□□□□ -0.26
CDH1-212ENST00000611625 SEL1LQ9UBV2 794 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 FBXL5Q9UKA1 691 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 TCRBV5S4A2TA0A5A2 114 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 F5H6K3 240 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 PDXKO00764 312 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 KLRC3Q07444 240 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 SMIM5Q71RC9 77 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 ELAC2Q9BQ52 826 aaKnown RBP13.4□□□□□ -0.26
CDH1-212ENST00000611625 VCXQ9H320 206 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.4□□□□□ -0.26
CDH1-212ENST00000611625 AMACRQ9UHK6 382 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 SCYL2Q6P3W7 929 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 TRAPPC11Q7Z392 1133 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 SLC7A3Q8WY07 619 aa13.4□□□□□ -0.26
CDH1-212ENST00000611625 KRT1P04264 644 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 TRIM49P0CI25 452 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 TRIM49CP0CI26 452 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 EIF2AK2P19525 551 aaKnown RBP13.39□□□□□ -0.27
CDH1-212ENST00000611625 GUCY1A3Q02108 690 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 MUM1Q2TAK8 710 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 NUGGCQ68CJ6 796 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 PADI6Q6TGC4 694 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 INTS2Q9H0H0 1204 aaKnown RBP13.39□□□□□ -0.27
CDH1-212ENST00000611625 ODF2LQ9ULJ1 636 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 L1RE1Q9UN81 338 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 NPHP3-ACAD11A0A0J9YXS1 232 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 PPP1R37O75864 691 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 SARSP49591 514 aaKnown RBP13.39□□□□□ -0.27
CDH1-212ENST00000611625 MUM1L1Q5H9M0 696 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms