RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 DCAF4Q8WV16 495 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 RNPC3Q96LT9 517 aaKnown RBP16■□□□□ 0.15
CTCFL-219ENST00000608720 SLC16A3O15427 465 aaKnown RBP16■□□□□ 0.15
CTCFL-219ENST00000608720 SPIRE1Q08AE8 756 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 EPHA7Q15375 998 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 BMT2Q1RMZ1 405 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 SFR1Q86XK3 245 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 LRRC45Q96CN5 670 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 RABEP2Q9H5N1 569 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 TYW1Q9NV66 732 aaKnown RBP16■□□□□ 0.15
CTCFL-219ENST00000608720 GGA2Q9UJY4 613 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 INTUQ9ULD6 942 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 PLAAQ9Y263 795 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 A0A0A6YYK5 440 aaPredicted RBP15.99■□□□□ 0.15
CTCFL-219ENST00000608720 GOLGA6L10A6NI86 522 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 CCDC188H7C350 402 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 PGRMC1O00264 195 aaKnown RBP15.99■□□□□ 0.15
CTCFL-219ENST00000608720 MEIS2O14770 477 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 ERVK-9P63128 1117 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 PABPC4Q13310 644 aaKnown RBP eCLIP15.99■□□□□ 0.15
CTCFL-219ENST00000608720 TRADDQ15628 312 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 SP8Q8IXZ3 490 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 TPCN2Q8NHX9 752 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 CRYGNQ8WXF5 182 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 MKL1Q969V6 931 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.99■□□□□ 0.152e-13■□□□□ 8.7
CTCFL-219ENST00000608720 REEP2Q9BRK0 252 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 EPN3Q9H201 632 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 NENFQ9UMX5 172 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.99■□□□□ 0.15
CTCFL-219ENST00000608720 SRRM3A6NNA2 597 aaPredicted RBP15.99■□□□□ 0.15
CTCFL-219ENST00000608720 ONECUT3O60422 494 aaPredicted RBP15.99■□□□□ 0.15
CTCFL-219ENST00000608720 H2AFZP0C0S5 128 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 SPATA31C1P0DKV0 1188 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 LSP1P33241 339 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 HOXD13P35453 343 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 PSMC6P62333 389 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 HLTFQ14527 1009 aaKnown RBP eCLIP15.99■□□□□ 0.15
CTCFL-219ENST00000608720 PRR16Q569H4 304 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 CDC42EP5Q6NZY7 148 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 H2AFVQ71UI9 128 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 MAATS1Q7Z4T9 603 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 SLFN11Q7Z7L1 901 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 SYCE1Q8N0S2 351 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 FAM20AQ96MK3 541 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 SAMM50Q9Y512 469 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 BRWD3Q6RI45 1802 aa15.99■□□□□ 0.15
CTCFL-219ENST00000608720 CCDC189A1A4V9 331 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 GTPBP10A4D1E9 387 aaKnown RBP15.98■□□□□ 0.15
CTCFL-219ENST00000608720 BHMG1C9JSJ3 638 aaPredicted RBP15.98■□□□□ 0.15
CTCFL-219ENST00000608720 RIMBP2O15034 1052 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 MEFVO15553 781 aaPredicted RBP15.98■□□□□ 0.15
CTCFL-219ENST00000608720 AKAP3O75969 853 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 NR3C1P04150 777 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 NPEPPSP55786 919 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 PREPLQ4J6C6 727 aaPredicted RBP15.98■□□□□ 0.15
CTCFL-219ENST00000608720 CEP85LQ5SZL2 805 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 HHIPL2Q6UWX4 724 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 MICALCLQ6ZW33 695 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 CERS5Q8N5B7 392 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 GIMAP7Q8NHV1 300 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 RBM46Q8TBY0 533 aaKnown RBP15.98■□□□□ 0.15
CTCFL-219ENST00000608720 TMBIM4Q9HC24 238 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 NYAP2Q9P242 653 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 SUCLA2Q9P2R7 463 aaPredicted RBP15.98■□□□□ 0.15
CTCFL-219ENST00000608720 MCM8Q9UJA3 840 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 UTRNP46939 3433 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 BTAF1O14981 1849 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 MEIS1O00470 390 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 PPP1R37O75864 691 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 GFPT2O94808 682 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 KIAA0754O94854 1291 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 FOSP01100 380 aaPredicted RBP15.98■□□□□ 0.15
CTCFL-219ENST00000608720 ZBTB48P10074 688 aaPredicted RBP15.98■□□□□ 0.15
CTCFL-219ENST00000608720 GYS1P13807 737 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 MDH1P40925 334 aaKnown RBP15.98■□□□□ 0.15
CTCFL-219ENST00000608720 JAM2P57087 298 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 DCAF17Q5H9S7 520 aaPredicted RBP15.98■□□□□ 0.15
CTCFL-219ENST00000608720 SLFN13Q68D06 897 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 PEX26Q7Z412 305 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 RASGEF1CQ8N431 466 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 KCTD17Q8N5Z5 321 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 ARFGAP2Q8N6H7 521 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 METTL13Q8N6R0 699 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 SIX2Q9NPC8 291 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 CAPN7Q9Y6W3 813 aa15.98■□□□□ 0.15
CTCFL-219ENST00000608720 SART1O43290 800 aaKnown RBP15.97■□□□□ 0.15
CTCFL-219ENST00000608720 RAD21O60216 631 aa15.97■□□□□ 0.15
CTCFL-219ENST00000608720 FERP16591 822 aa15.97■□□□□ 0.15
CTCFL-219ENST00000608720 ECHS1P30084 290 aa15.97■□□□□ 0.15
CTCFL-219ENST00000608720 HSD17B3P37058 310 aa15.97■□□□□ 0.15
CTCFL-219ENST00000608720 ITGB3BPQ13352 177 aaPredicted RBP15.97■□□□□ 0.15
CTCFL-219ENST00000608720 WLSQ5T9L3 541 aa15.97■□□□□ 0.15
CTCFL-219ENST00000608720 KRT27Q7Z3Y8 459 aa15.97■□□□□ 0.15
CTCFL-219ENST00000608720 AMNQ9BXJ7 453 aa15.97■□□□□ 0.15
CTCFL-219ENST00000608720 STXBP5LQ9Y2K9 1186 aa15.97■□□□□ 0.15
CTCFL-219ENST00000608720 GCOM1H8Y6P7 765 aaPredicted RBP15.96■□□□□ 0.15
CTCFL-219ENST00000608720 KRIT1O00522 736 aa15.96■□□□□ 0.15
CTCFL-219ENST00000608720 TBCAO75347 108 aaKnown RBP15.96■□□□□ 0.15
CTCFL-219ENST00000608720 MYZAPP0CAP1 466 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms