RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 C22orf23Q9BZE7 217 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 PCDHA10Q9Y5I2 948 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 ADGRA3Q8IWK6 1321 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 CYP3A7-CYP3A51PA0A087WV96 503 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 GTPBP6O43824 516 aaPredicted RBP14.76□□□□□ -0.05
LIG1-212ENST00000596549 GAS7O60861 476 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 CDKL5O76039 1030 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 FDPSP14324 419 aaKnown RBP14.76□□□□□ -0.05
LIG1-212ENST00000596549 CYP3A7P24462 503 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 NONOQ15233 471 aaKnown RBP eCLIP14.76□□□□□ -0.05
LIG1-212ENST00000596549 INF2Q27J81 1249 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 EARS2Q5JPH6 523 aaKnown RBP14.76□□□□□ -0.05
LIG1-212ENST00000596549 ZNF484Q5JVG2 852 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 LRCH2Q5VUJ6 765 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 IER5Q5VY09 327 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 GALNT17Q6IS24 598 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 MOXD1Q6UVY6 613 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 TRMT1LQ7Z2T5 733 aaKnown RBP14.76□□□□□ -0.05
LIG1-212ENST00000596549 NECAB1Q8N987 351 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 OXER1Q8TDS5 423 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 GTF3C6Q969F1 213 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 YME1L1Q96TA2 773 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 RIT2Q99578 217 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 TEKT3Q9BXF9 490 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 CELF4Q9BZC1 486 aaKnown RBP14.76□□□□□ -0.05
LIG1-212ENST00000596549 CDHR5Q9HBB8 845 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 TCEAL9Q9UHQ7 104 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 SQORQ9Y6N5 450 aa14.76□□□□□ -0.05
LIG1-212ENST00000596549 M0QZ92 97 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 OATP04181 439 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 PRKCEQ02156 737 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 ANKRD1Q15327 319 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 TMEM266Q2M3C6 531 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 TJAP1Q5JTD0 557 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 KRT25Q7Z3Z0 450 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 RTN4RL1Q86UN2 441 aaPredicted RBP14.75□□□□□ -0.05
LIG1-212ENST00000596549 CKAP2LQ8IYA6 745 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 KIAA0319LQ8IZA0 1049 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 CRIPAKQ8N1N5 446 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 LINC01465Q8N7H1 131 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 NSUN7Q8NE18 718 aaKnown RBP14.75□□□□□ -0.05
LIG1-212ENST00000596549 PPP1R16BQ96T49 567 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 TMX1Q9H3N1 280 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 DISC1Q9NRI5 854 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 ORC3Q9UBD5 711 aaPredicted RBP14.75□□□□□ -0.05
LIG1-212ENST00000596549 PADI3Q9ULW8 664 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 SAMM50Q9Y512 469 aa14.75□□□□□ -0.05
LIG1-212ENST00000596549 MUC3AQ02505 3323 aa14.74□□□□□ -0.05
LIG1-212ENST00000596549 FAM205CA6NFA0 338 aa14.74□□□□□ -0.05
LIG1-212ENST00000596549 ENPP3O14638 875 aa14.74□□□□□ -0.05
LIG1-212ENST00000596549 SFNP31947 248 aa14.74□□□□□ -0.05
LIG1-212ENST00000596549 CLCN3P51790 818 aa14.74□□□□□ -0.05
LIG1-212ENST00000596549 JAK3P52333 1124 aa14.74□□□□□ -0.05
LIG1-212ENST00000596549 TFF2Q03403 129 aa14.74□□□□□ -0.05
LIG1-212ENST00000596549 PAK2Q13177 524 aa14.74□□□□□ -0.05
LIG1-212ENST00000596549 EPC2Q52LR7 807 aa14.74□□□□□ -0.05
LIG1-212ENST00000596549 FBXO22Q8NEZ5 403 aa14.74□□□□□ -0.05
LIG1-212ENST00000596549 ATXN2LQ8WWM7 1075 aaKnown RBP14.74□□□□□ -0.05
LIG1-212ENST00000596549 ZNF689Q96CS4 500 aaPredicted RBP14.74□□□□□ -0.05
LIG1-212ENST00000596549 ERVK-5Q9HDB9 667 aa14.74□□□□□ -0.05
LIG1-212ENST00000596549 DDX25Q9UHL0 483 aaKnown RBP14.74□□□□□ -0.05
LIG1-212ENST00000596549 TMEM150BA6NC51 233 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 MGEA5O60502 916 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 JAK2O60674 1132 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 VTNP04004 478 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 KIZQ2M2Z5 673 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 LETM2Q2VYF4 491 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 C8orf34Q49A92 452 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 NEK8Q86SG6 692 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 NME8Q8N427 588 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 TNFRSF25Q93038 417 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 FAM167AQ96KS9 214 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 ASB2Q96Q27 587 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 OSMRQ99650 979 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 KCNMB3Q9NPA1 279 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 VAV3Q9UKW4 847 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 CEP131Q9UPN4 1083 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 GINS2Q9Y248 185 aa14.73□□□□□ -0.05
LIG1-212ENST00000596549 NOC2LQ9Y3T9 749 aaKnown RBP14.73□□□□□ -0.05
LIG1-212ENST00000596549 CCDC194A0A1B0GVG4 234 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 GPR32O75388 356 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 DGKIO75912 1065 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 STBD1O95210 358 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 NEK4P51957 841 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 NR5A1Q13285 461 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 TARBP2Q15633 366 aaKnown RBP14.72□□□□□ -0.05
LIG1-212ENST00000596549 PIK3AP1Q6ZUJ8 805 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 MIER3Q7Z3K6 550 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 FAM228AQ86W67 206 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 LRRC71Q8N4P6 559 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 RDM1Q8NG50 284 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 SAMD11Q96NU1 681 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 CEP89Q96ST8 783 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 FTHL17Q9BXU8 183 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 TSPYL2Q9H2G4 693 aaPredicted RBP14.72□□□□□ -0.05
LIG1-212ENST00000596549 LMCD1Q9NZU5 365 aa14.72□□□□□ -0.05
LIG1-212ENST00000596549 H3BNC9 293 aa14.71□□□□□ -0.05
LIG1-212ENST00000596549 EML1O00423 815 aa14.71□□□□□ -0.05
LIG1-212ENST00000596549 XBP1P17861 261 aa14.71□□□□□ -0.05
LIG1-212ENST00000596549 KCNQ1P51787 676 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms