RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 PPP1R16BQ96T49 567 aa17.14■□□□□ 0.33
ERCC1-213ENST00000592023 KIF2CQ99661 725 aa17.14■□□□□ 0.33
ERCC1-213ENST00000592023 AGO3Q9H9G7 860 aaKnown RBP17.14■□□□□ 0.33
ERCC1-213ENST00000592023 MTUS1Q9ULD2 1270 aa17.14■□□□□ 0.33
ERCC1-213ENST00000592023 CEP131Q9UPN4 1083 aa17.14■□□□□ 0.33
ERCC1-213ENST00000592023 LIMCH1Q9UPQ0 1083 aa17.14■□□□□ 0.33
ERCC1-213ENST00000592023 GINS2Q9Y248 185 aa17.14■□□□□ 0.33
ERCC1-213ENST00000592023 LINC01553A4QN01 128 aa17.13■□□□□ 0.33
ERCC1-213ENST00000592023 CCNT1O60563 726 aaKnown RBP17.13■□□□□ 0.33
ERCC1-213ENST00000592023 GCFC2P16383 781 aaKnown RBP17.13■□□□□ 0.33
ERCC1-213ENST00000592023 TRIM29Q14134 588 aa17.13■□□□□ 0.33
ERCC1-213ENST00000592023 CCDC85BQ15834 202 aaPredicted RBP17.13■□□□□ 0.33
ERCC1-213ENST00000592023 METTL13Q8N6R0 699 aa17.13■□□□□ 0.33
ERCC1-213ENST00000592023 YME1L1Q96TA2 773 aa17.13■□□□□ 0.33
ERCC1-213ENST00000592023 CELF4Q9BZC1 486 aaKnown RBP17.13■□□□□ 0.33
ERCC1-213ENST00000592023 MMP1P03956 469 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 CLCN3P51790 818 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 HTRA4P83105 476 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-213ENST00000592023 PAK2Q13177 524 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 B3GNT9Q6UX72 402 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 KIAA0319LQ8IZA0 1049 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 NME8Q8N427 588 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 RDM1Q8NG50 284 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 GDPD5Q8WTR4 605 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 TNFRSF25Q93038 417 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 TOP1MTQ969P6 601 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 KCNMB3Q9NPA1 279 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 SEPT9Q9UHD8 586 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-213ENST00000592023 INSL6Q9Y581 213 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 EVPLQ92817 2033 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 COL4A6Q14031 1691 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 KDM3AQ9Y4C1 1321 aa17.12■□□□□ 0.33
ERCC1-213ENST00000592023 MYO9BQ13459 2157 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 VTNP04004 478 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 GUCY1B3Q02153 619 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 KRT40Q6A162 431 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 PPP4R3AQ6IN85 833 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 DIS3L2Q8IYB7 885 aaKnown RBP17.11■□□□□ 0.33
ERCC1-213ENST00000592023 LRRC71Q8N4P6 559 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 BANK1Q8NDB2 785 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 LINC01599Q8WXQ3 324 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 TGS1Q96RS0 853 aaKnown RBP17.11■□□□□ 0.33
ERCC1-213ENST00000592023 NAP1L4Q99733 375 aaKnown RBP17.11■□□□□ 0.33
ERCC1-213ENST00000592023 PRDM6Q9NQX0 595 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 VAV3Q9UKW4 847 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 SQORQ9Y6N5 450 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
ERCC1-213ENST00000592023 TMEM150BA6NC51 233 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 BTBD18B2RXH4 712 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 GTPBP6O43824 516 aaPredicted RBP17.1■□□□□ 0.33
ERCC1-213ENST00000592023 MARCH6O60337 910 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 RBM25P49756 843 aaKnown RBP17.1■□□□□ 0.33
ERCC1-213ENST00000592023 GRB10Q13322 594 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 KIZQ2M2Z5 673 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 SP7Q8TDD2 431 aaPredicted RBP17.1■□□□□ 0.33
ERCC1-213ENST00000592023 TMEM40Q8WWA1 233 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 FAM20AQ96MK3 541 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 MAP7D2Q96T17 732 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 OSMRQ99650 979 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 CDHR5Q9HBB8 845 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 NRBP2Q9NSY0 501 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 PADI3Q9ULW8 664 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 EYSQ5T1H1 3165 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 NLRC5Q86WI3 1866 aa17.1■□□□□ 0.33
ERCC1-213ENST00000592023 EML1O00423 815 aa17.09■□□□□ 0.33
ERCC1-213ENST00000592023 MAGEB2O15479 319 aa17.09■□□□□ 0.33
ERCC1-213ENST00000592023 ERVK-21P61565 698 aa17.09■□□□□ 0.33
ERCC1-213ENST00000592023 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
ERCC1-213ENST00000592023 PPP2R5CQ13362 524 aa17.09■□□□□ 0.33
ERCC1-213ENST00000592023 MTERF2Q49AM1 385 aa17.09■□□□□ 0.33
ERCC1-213ENST00000592023 EFCAB12Q6NXP0 572 aa17.09■□□□□ 0.33
ERCC1-213ENST00000592023 HAS1Q92839 578 aa17.09■□□□□ 0.33
ERCC1-213ENST00000592023 C17orf80Q9BSJ5 609 aa17.09■□□□□ 0.33
ERCC1-213ENST00000592023 AKT3Q9Y243 479 aa17.09■□□□□ 0.33
ERCC1-213ENST00000592023 NOC2LQ9Y3T9 749 aaKnown RBP17.09■□□□□ 0.33
ERCC1-213ENST00000592023 MTCH2Q9Y6C9 303 aa17.09■□□□□ 0.33
ERCC1-213ENST00000592023 CHD7Q9P2D1 2997 aa17.08■□□□□ 0.33
ERCC1-213ENST00000592023 ADGRA3Q8IWK6 1321 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 ENPP3O14638 875 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 TBX3O15119 743 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 RPS6KA5O75582 802 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 IBSPP21815 317 aaPredicted RBP17.08■□□□□ 0.32
ERCC1-213ENST00000592023 TBC1D8BQ0IIM8 1120 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 XKR3Q5GH77 459 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 NCAPH2Q6IBW4 605 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 LINC01465Q8N7H1 131 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 ZSCAN31Q96LW9 406 aaPredicted RBP17.08■□□□□ 0.32
ERCC1-213ENST00000592023 SH2D3AQ9BRG2 576 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 LLPHQ9BRT6 129 aaKnown RBP17.08■□□□□ 0.32
ERCC1-213ENST00000592023 FTHL17Q9BXU8 183 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 ERVK-5Q9HDB9 667 aa17.08■□□□□ 0.32
ERCC1-213ENST00000592023 SH2B1Q9NRF2 756 aaPredicted RBP17.08■□□□□ 0.32
ERCC1-213ENST00000592023 RALGAPA2Q2PPJ7 1873 aa17.07■□□□□ 0.32
ERCC1-213ENST00000592023 WNT7AO00755 349 aa17.07■□□□□ 0.32
ERCC1-213ENST00000592023 LPXNO60711 386 aa17.07■□□□□ 0.32
ERCC1-213ENST00000592023 TMOD1P28289 359 aa17.07■□□□□ 0.32
ERCC1-213ENST00000592023 PSMC5P62195 406 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms