RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	NBPF4	Q96M43	638 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	AMN	Q9BXJ7	453 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	PFDN2	Q9UHV9	154 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	PUF60	Q9UHX1	559 aa	Known RBP	4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	U2SURP	O15042	1029 aa	Known RBP	4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	NARS	O43776	548 aa	Known RBP	4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	DIAPH1	O60610	1272 aa	Known RBP	4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	CRTAM	O95727	393 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	SRGAP2C	P0DJJ0	459 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	ACRV1	P26436	265 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	ECE1	P42892	770 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	ABHD18	Q0P651	414 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	FHL2	Q14192	279 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	LONRF2	Q1L5Z9	754 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	EP400NL	Q6ZTU2	488 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	NOSTRIN	Q8IVI9	506 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	AMER2	Q8N7J2	671 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	IL17D	Q8TAD2	202 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	DHRS4	Q9BTZ2	278 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	OR10A5	Q9H207	317 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	OR10A2	Q9H208	303 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	CCDC9	Q9Y3X0	531 aa	Known RBP	4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	PCDHA9	Q9Y5H5	950 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	RIMBP3C	A6NJZ7	1639 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	RIMBP3B	A6NNM3	1639 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796	RIMBP3	Q9UFD9	1639 aa		4.54	□□□□□ -1.68
VAPA-208	ENST00000584796		A0A0G2JNJ9	132 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	PMS2P1	A4D2B8	440 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	KCNK3	O14649	394 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	MAF	O75444	373 aa	Predicted RBP	4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	FAM153B	P0C7A2	387 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	MRE11	P49959	708 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	DGCR2	P98153	550 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	CD83	Q01151	205 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	HGFAC	Q04756	655 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	FOXL1	Q12952	345 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	PCOLCE	Q15113	449 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	TM4SF20	Q53R12	229 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	LRSAM1	Q6UWE0	723 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	OTOP2	Q7RTS6	562 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	C1orf210	Q8IVY1	113 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	CACTIN	Q8WUQ7	758 aa	Known RBP	4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	ASB15	Q8WXK1	588 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	IPO9	Q96P70	1041 aa	Known RBP	4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	C12orf65	Q9H3J6	166 aa	Known RBP	4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	UCKL1	Q9NWZ5	548 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	PLA2G3	Q9NZ20	509 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796		Q9UFV3	132 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	CDC42EP3	Q9UKI2	254 aa		4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	MRPS23	Q9Y3D9	190 aa	Known RBP	4.53	□□□□□ -1.68
VAPA-208	ENST00000584796	MME	P08473	750 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	C1S	P09871	688 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	MSX2	P35548	267 aa	Predicted RBP	4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	DNM2	P50570	870 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	TGFB2	P61812	414 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	PURA	Q00577	322 aa	Known RBP	4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	LSM12	Q3MHD2	195 aa	Known RBP	4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	FSTL4	Q6MZW2	842 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	FILIP1	Q7Z7B0	1213 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	GPR135	Q8IZ08	494 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	CISD2	Q8N5K1	135 aa	Known RBP	4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	GSTCD	Q8NEC7	633 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	CELF4	Q9BZC1	486 aa	Known RBP	4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	CSRNP2	Q9H175	543 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	NELFA	Q9H3P2	528 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	SLC52A2	Q9HAB3	445 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	KCNH7	Q9NS40	1196 aa		4.52	□□□□□ -1.69
VAPA-208	ENST00000584796	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	RASSF10	A6NK89	507 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	SDHA	P31040	664 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	MCM7	P33993	719 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	MEOX1	P50221	254 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	MOGS	Q13724	837 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	TRIM61	Q5EBN2	209 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	GRAMD4	Q6IC98	578 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	ADGRE4P	Q86SQ3	457 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	RTKN2	Q8IZC4	609 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	DLG3	Q92796	817 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	TLR9	Q9NR96	1032 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	SIRPG	Q9P1W8	387 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	ASB1	Q9Y576	335 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	B3GALT1	Q9Y5Z6	326 aa		4.51	□□□□□ -1.69
VAPA-208	ENST00000584796	SMARCA4	P51532	1647 aa		4.5	□□□□□ -1.69
VAPA-208	ENST00000584796	NCAPD3	P42695	1498 aa		4.5	□□□□□ -1.69
VAPA-208	ENST00000584796	ATAD2B	Q9ULI0	1458 aa		4.5	□□□□□ -1.69
VAPA-208	ENST00000584796	WDR33	Q9C0J8	1336 aa	Known RBP	4.5	□□□□□ -1.69
VAPA-208	ENST00000584796	CCDC85C	A6NKD9	419 aa		4.5	□□□□□ -1.69
VAPA-208	ENST00000584796	SCD	O00767	359 aa		4.5	□□□□□ -1.69
VAPA-208	ENST00000584796	SLC26A4	O43511	780 aa		4.5	□□□□□ -1.69
VAPA-208	ENST00000584796	EFCAB14	O75071	495 aa		4.5	□□□□□ -1.69
VAPA-208	ENST00000584796	ZC3H6	P61129	1189 aa	Known RBP	4.5	□□□□□ -1.69
VAPA-208	ENST00000584796	DPT	Q07507	201 aa		4.5	□□□□□ -1.69
VAPA-208	ENST00000584796	SERINC3	Q13530	473 aa		4.5	□□□□□ -1.69
VAPA-208	ENST00000584796	RASA3	Q14644	834 aa		4.5	□□□□□ -1.69

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