RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 KIAA0319Q5VV43 1072 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 TSHZ3Q63HK5 1081 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 PDE12Q6L8Q7 609 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 MCF2L2Q86YR7 1114 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 SIX5Q8N196 739 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 C12orf76Q8N812 135 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 TDRD5Q8NAT2 981 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 COLGALT1Q8NBJ5 622 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 DNAJB3Q8WWF6 145 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 CASP10Q92851 521 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 ZDHHC16Q969W1 377 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 ZBTB10Q96DT7 871 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 USP26Q9BXU7 913 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 CWH43Q9H720 699 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 AAASQ9NRG9 546 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 ECHDC1Q9NTX5 307 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 RABGEF1Q9UJ41 708 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 DUSP12Q9UNI6 340 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 PCDHB12Q9Y5F1 795 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 HCFC2Q9Y5Z7 792 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 DCDC2BA2VCK2 349 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 MBLAC1A4D2B0 266 aaPredicted RBP8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 KRBA1A5PL33 1030 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 NARSO43776 548 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 MGEA5O60502 916 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 EOMESO95936 686 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 CFBP00751 764 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 STAG3L1P0CL83 205 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 TGFB3P10600 412 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 MTHFRP42898 656 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 SEMA3FQ13275 785 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 TDGQ13569 410 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 QRICH1Q2TAL8 776 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 FAM102BQ5T8I3 360 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 CES5AQ6NT32 575 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 TAF2Q6P1X5 1199 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 STOX1Q6ZVD7 989 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 THNSL1Q8IYQ7 743 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 ADGRF4Q8IZF3 695 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 PANK1Q8TE04 598 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 MRPS27Q92552 414 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 TCF25Q9BQ70 676 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 ADAM33Q9BZ11 813 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 CYP26B1Q9NR63 512 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 TYW1Q9NV66 732 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 DLGAP2Q9P1A6 1054 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 PADI3Q9ULW8 664 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 LZTS1Q9Y250 596 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 USTQ9Y2C2 406 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 NRCAMQ92823 1304 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 ZFYVE26Q68DK2 2539 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 ZZEF1O43149 2961 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 PATJQ8NI35 1801 aa8.94□□□□□ -0.98
SMARCE1-217ENST00000580654 TBKBP1A7MCY6 615 aa8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 NOP56O00567 594 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 NRG2O14511 850 aaPredicted RBP8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 CLASP2O75122 1294 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 MRPS6P82932 125 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 PLCB3Q01970 1234 aa8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 ZMYM1Q5SVZ6 1142 aa8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 RARS2Q5T160 578 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 SPOUT1Q5T280 376 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 GPATCH4Q5T3I0 446 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 UTP14CQ5TAP6 766 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 VPS53Q5VIR6 699 aa8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 KIAA1841Q6NSI8 718 aa8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 METTL7BQ6UX53 244 aa8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 CYFIP1Q7L576 1253 aa8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 MAML2Q8IZL2 1156 aaPredicted RBP8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 FTHL17Q9BXU8 183 aa8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 ENTPD7Q9NQZ7 604 aa8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 MRPL11Q9Y3B7 192 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 CACNA1IQ9P0X4 2223 aa8.93□□□□□ -0.98
SMARCE1-217ENST00000580654 SPEGQ15772 3267 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 IGSF9BQ9UPX0 1349 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 PPP1R11O60927 126 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 HMMRO75330 724 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 IBSPP21815 317 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 TGM1P22735 817 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 HOXA13P31271 388 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 SARSP49591 514 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 MRPS9P82933 396 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 TMEM62Q0P6H9 643 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 TMEM132AQ24JP5 1023 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 RRP12Q5JTH9 1297 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 ZC3H14Q6PJT7 736 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 LRRC55Q6ZSA7 311 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 LAPTM4BQ86VI4 370 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 TTC14Q96N46 770 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 JMJD4Q9H9V9 463 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 KCNK12Q9HB15 430 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 NGRNQ9NPE2 291 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 TUBE1Q9UJT0 475 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 DBR1Q9UK59 544 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 FBXL21Q9UKT6 434 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 ZNF215Q9UL58 517 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 LRFN2Q9ULH4 789 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 SQORQ9Y6N5 450 aa8.92□□□□□ -0.98
SMARCE1-217ENST00000580654 COL4A3Q01955 1670 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 FLNBO75369 2602 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms