RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 KIZQ2M2Z5 673 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 PRR16Q569H4 304 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 FAM102BQ5T8I3 360 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 FAM160B1Q5W0V3 765 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 MIS18BP1Q6P0N0 1132 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 BLOC1S2Q6QNY1 142 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 ADGRD2Q7Z7M1 963 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 NPAS4Q8IUM7 802 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 CKAP2LQ8IYA6 745 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 CRIPAKQ8N1N5 446 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 KLHL23Q8NBE8 558 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 SPPL3Q8TCT6 385 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 CRYGNQ8WXF5 182 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 KCNB2Q92953 911 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 CLP1Q92989 425 aaKnown RBP10.15□□□□□ -0.78
GGA3-207ENST00000578896 OSMRQ99650 979 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 C11orf84Q9BUA3 381 aaPredicted RBP10.15□□□□□ -0.78
GGA3-207ENST00000578896 SLC26A6Q9BXS9 759 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 ERVK-5Q9HDB9 667 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 VPS54Q9P1Q0 977 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 PIEZO1Q92508 2521 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 PLXNA4Q9HCM2 1894 aa10.15□□□□□ -0.79
GGA3-207ENST00000578896 hCG_1984214I3L0E3 225 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 PRPF3O43395 683 aaKnown RBP10.14□□□□□ -0.79
GGA3-207ENST00000578896 RPS6KA5O75582 802 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 CYP3A4P08684 503 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 HMGB1P09429 215 aaKnown RBP10.14□□□□□ -0.79
GGA3-207ENST00000578896 RPS6KB1P23443 525 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 HSPA4P34932 840 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 CLCN3P51790 818 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 SPOUT1Q5T280 376 aaKnown RBP10.14□□□□□ -0.79
GGA3-207ENST00000578896 NIPA1Q7RTP0 329 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 RBM23Q86U06 439 aaKnown RBP10.14□□□□□ -0.79
GGA3-207ENST00000578896 REXO1Q8N1G1 1221 aaKnown RBP10.14□□□□□ -0.79
GGA3-207ENST00000578896 NME8Q8N427 588 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 METTL13Q8N6R0 699 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 ZNF713Q8N859 430 aaPredicted RBP10.14□□□□□ -0.79
GGA3-207ENST00000578896 POF1BQ8WVV4 589 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 TNPO1Q92973 898 aaKnown RBP10.14□□□□□ -0.79
GGA3-207ENST00000578896 ADAM2Q99965 735 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 FTHL17Q9BXU8 183 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 ZMYND12Q9H0C1 365 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 GLT8D2Q9H1C3 349 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 C6orf50Q9HD87 102 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 GABBR1Q9UBS5 961 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 LRFN2Q9ULH4 789 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 ST3GAL5Q9UNP4 418 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 ZDBF2Q9HCK1 2354 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 TECTAO75443 2155 aa10.14□□□□□ -0.79
GGA3-207ENST00000578896 KDM3AQ9Y4C1 1321 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 TBKBP1A7MCY6 615 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 CHMP2AO43633 222 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 TBX10O75333 385 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 C22orf31O95567 290 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 MMP1P03956 469 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 STAG3L1P0CL83 205 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 FGFR1P11362 822 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 RBM10P98175 930 aaKnown RBP10.13□□□□□ -0.79
GGA3-207ENST00000578896 COL19A1Q14993 1142 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 NTRK3Q16288 839 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 CTC1Q2NKJ3 1217 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 ZNF484Q5JVG2 852 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 FAM228AQ86W67 206 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 CMTR2Q8IYT2 770 aaKnown RBP10.13□□□□□ -0.79
GGA3-207ENST00000578896 LRRC71Q8N4P6 559 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 LENG9Q96B70 501 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 FAM122AQ96E09 287 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 LMAN2LQ9H0V9 348 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 RWDD3Q9Y3V2 267 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 SAMM50Q9Y512 469 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 PCDHB7Q9Y5E2 793 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 MAFBQ9Y5Q3 323 aaPredicted RBP10.13□□□□□ -0.79
GGA3-207ENST00000578896 SQORQ9Y6N5 450 aa10.13□□□□□ -0.79
GGA3-207ENST00000578896 WDFY4Q6ZS81 3184 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 MYO10Q9HD67 2058 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 CCDC196A0A1B0GTZ2 297 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 ESYT2A0FGR8 921 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 DENND3A2RUS2 1198 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 PER2O15055 1255 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 MSH4O15457 936 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 MBTPS2O43462 519 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 ZNF862O60290 1169 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 GPR37L1O60883 481 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 GPR32O75388 356 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 PSAPP07602 524 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 FGFR4P22455 802 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 PDIA3P30101 505 aaKnown RBP10.12□□□□□ -0.79
GGA3-207ENST00000578896 PLA2G5P39877 138 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 NRIP1P48552 1158 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 SARSP49591 514 aaKnown RBP10.12□□□□□ -0.79
GGA3-207ENST00000578896 SLC26A2P50443 739 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 RCAN1P53805 252 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 AKAP17AQ02040 695 aaKnown RBP10.12□□□□□ -0.79
GGA3-207ENST00000578896 ZP2Q05996 745 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 ADAM15Q13444 863 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 UGCGQ16739 394 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 ZNF746Q6NUN9 644 aaPredicted RBP10.12□□□□□ -0.79
GGA3-207ENST00000578896 EFCAB12Q6NXP0 572 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 AIFM3Q96NN9 605 aa10.12□□□□□ -0.79
GGA3-207ENST00000578896 SH2D3AQ9BRG2 576 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms