RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 CDY2AQ9Y6F7 541 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 TANC1Q9C0D5 1861 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 SMIM35A0A1B0GVV1 85 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 SLC37A4O43826 429 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 PSMD10O75832 226 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 GCFC2P16383 781 aaKnown RBP16.29■□□□□ 0.2
COMMD4-225ENST00000569245 ATP4AP20648 1035 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 PPP4R3AQ6IN85 833 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 NME8Q8N427 588 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 METTL13Q8N6R0 699 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 SLC17A8Q8NDX2 589 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 ETNPPLQ8TBG4 499 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 APBB2Q92870 758 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 FAM167AQ96KS9 214 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 MBOAT7Q96N66 472 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 CEP131Q9UPN4 1083 aa16.29■□□□□ 0.2
COMMD4-225ENST00000569245 COL1A2P08123 1366 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 H3BQV1 296 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 GJB5O95377 273 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 MMP1P03956 469 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 ZSCAN22P10073 491 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-225ENST00000569245 IGFBP4P22692 258 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 MGAT3Q09327 533 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 LPIN1Q14693 890 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 SAFBQ15424 915 aaKnown RBP eCLIP16.28■□□□□ 0.2
COMMD4-225ENST00000569245 KRT40Q6A162 431 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 DIS3L2Q8IYB7 885 aaKnown RBP16.28■□□□□ 0.2
COMMD4-225ENST00000569245 MAFAQ8NHW3 353 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-225ENST00000569245 RAD9AQ99638 391 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 CERS4Q9HA82 394 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 GINS2Q9Y248 185 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 TRPV2Q9Y5S1 764 aa16.28■□□□□ 0.2
COMMD4-225ENST00000569245 TET1Q8NFU7 2136 aa16.27■□□□□ 0.2
COMMD4-225ENST00000569245 FAM205CA6NFA0 338 aa16.27■□□□□ 0.2
COMMD4-225ENST00000569245 BTBD18B2RXH4 712 aa16.27■□□□□ 0.2
COMMD4-225ENST00000569245 UPP2O95045 317 aa16.27■□□□□ 0.2
COMMD4-225ENST00000569245 OATP04181 439 aa16.27■□□□□ 0.2
COMMD4-225ENST00000569245 GUCY1B3Q02153 619 aa16.27■□□□□ 0.2
COMMD4-225ENST00000569245 PRKCEQ02156 737 aa16.27■□□□□ 0.2
COMMD4-225ENST00000569245 EARS2Q5JPH6 523 aaKnown RBP16.27■□□□□ 0.2
COMMD4-225ENST00000569245 FBXO47Q5MNV8 452 aa16.27■□□□□ 0.2
COMMD4-225ENST00000569245 TSHZ1Q6ZSZ6 1077 aa16.27■□□□□ 0.2
COMMD4-225ENST00000569245 RDM1Q8NG50 284 aa16.27■□□□□ 0.2
COMMD4-225ENST00000569245 FAM20AQ96MK3 541 aa16.27■□□□□ 0.2
COMMD4-225ENST00000569245 CELF4Q9BZC1 486 aaKnown RBP16.27■□□□□ 0.2
COMMD4-225ENST00000569245 IGSF9BQ9UPX0 1349 aa16.26■□□□□ 0.19
COMMD4-225ENST00000569245 VPS37CA5D8V6 355 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-225ENST00000569245 ZBTB42B2RXF5 422 aa16.26■□□□□ 0.19
COMMD4-225ENST00000569245 BAG4O95429 457 aaKnown RBP16.26■□□□□ 0.19
COMMD4-225ENST00000569245 TAP1Q03518 808 aa16.26■□□□□ 0.19
COMMD4-225ENST00000569245 UGCGQ16739 394 aa16.26■□□□□ 0.19
COMMD4-225ENST00000569245 KIAA0319LQ8IZA0 1049 aa16.26■□□□□ 0.19
COMMD4-225ENST00000569245 ARNTL2Q8WYA1 636 aa16.26■□□□□ 0.19
COMMD4-225ENST00000569245 INSL6Q9Y581 213 aa16.26■□□□□ 0.19
COMMD4-225ENST00000569245 LCHNA4D1U4 455 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 MAGEB2O15479 319 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 ZNF862O60290 1169 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 C22orf31O95567 290 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 F13A1P00488 732 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 TMOD1P28289 359 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 CD52P31358 61 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 PAK2Q13177 524 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 USP38Q8NB14 1042 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 BANK1Q8NDB2 785 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 PPM1EQ8WY54 764 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 TNFRSF25Q93038 417 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 PPP1R16BQ96T49 567 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 AGO3Q9H9G7 860 aaKnown RBP16.25■□□□□ 0.19
COMMD4-225ENST00000569245 SUGCTQ9HAC7 445 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 KCNMB3Q9NPA1 279 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 SEPT9Q9UHD8 586 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-225ENST00000569245 A0A0C4DFX4 3053 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 EYSQ5T1H1 3165 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 CHD7Q9P2D1 2997 aa16.25■□□□□ 0.19
COMMD4-225ENST00000569245 KAT6AQ92794 2004 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-225ENST00000569245 DDX11L8A8MPP1 907 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 TBX3O15119 743 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 ARHGEF15O94989 841 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 ATP2B1P20020 1258 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-225ENST00000569245 GNL2Q13823 731 aaKnown RBP16.24■□□□□ 0.19
COMMD4-225ENST00000569245 EFCAB12Q6NXP0 572 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 SLFN12Q8IYM2 578 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 TOP1MTQ969P6 601 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 MAP7D2Q96T17 732 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 YME1L1Q96TA2 773 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 ZSCAN16Q9H4T2 348 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-225ENST00000569245 VAV3Q9UKW4 847 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 MTUS1Q9ULD2 1270 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 AKT3Q9Y243 479 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 SQORQ9Y6N5 450 aa16.24■□□□□ 0.19
COMMD4-225ENST00000569245 RFXAPO00287 272 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 EML1O00423 815 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 ENPP3O14638 875 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 VTNP04004 478 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 CLCN3P51790 818 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 PSMC5P62195 406 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 TBC1D8BQ0IIM8 1120 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms