RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 CERS4Q9HA82 394 aa22.89■■□□□ 1.25
CLK3-225ENST00000569063 BRMS1Q9HCU9 246 aa22.89■■□□□ 1.25
CLK3-225ENST00000569063 KCNMB3Q9NPA1 279 aa22.89■■□□□ 1.25
CLK3-225ENST00000569063 NRBP2Q9NSY0 501 aa22.89■■□□□ 1.25
CLK3-225ENST00000569063 MMP1P03956 469 aa22.88■■□□□ 1.25
CLK3-225ENST00000569063 OATP04181 439 aa22.88■■□□□ 1.25
CLK3-225ENST00000569063 POU3F3P20264 500 aaPredicted RBP22.88■■□□□ 1.25
CLK3-225ENST00000569063 NR5A1Q13285 461 aa22.88■■□□□ 1.25
CLK3-225ENST00000569063 TRMT1LQ7Z2T5 733 aaKnown RBP22.88■■□□□ 1.25
CLK3-225ENST00000569063 MIER3Q7Z3K6 550 aa22.88■■□□□ 1.25
CLK3-225ENST00000569063 ARNTL2Q8WYA1 636 aa22.88■■□□□ 1.25
CLK3-225ENST00000569063 MYH9P35579 1960 aaKnown RBP22.88■■□□□ 1.25
CLK3-225ENST00000569063 LINC01553A4QN01 128 aa22.87■■□□□ 1.25
CLK3-225ENST00000569063 EPOPA6NHQ4 379 aa22.87■■□□□ 1.25
CLK3-225ENST00000569063 RFXAPO00287 272 aa22.87■■□□□ 1.25
CLK3-225ENST00000569063 ENPP3O14638 875 aa22.87■■□□□ 1.25
CLK3-225ENST00000569063 TBX3O15119 743 aa22.87■■□□□ 1.25
CLK3-225ENST00000569063 MAGEB2O15479 319 aa22.87■■□□□ 1.25
CLK3-225ENST00000569063 CCNT1O60563 726 aaKnown RBP22.87■■□□□ 1.25
CLK3-225ENST00000569063 CD52P31358 61 aa22.87■■□□□ 1.25
CLK3-225ENST00000569063 PRKCEQ02156 737 aa22.87■■□□□ 1.25
CLK3-225ENST00000569063 UGCGQ16739 394 aa22.87■■□□□ 1.25
CLK3-225ENST00000569063 SP7Q8TDD2 431 aaPredicted RBP22.87■■□□□ 1.25
CLK3-225ENST00000569063 ZSCAN31Q96LW9 406 aaPredicted RBP22.87■■□□□ 1.25
CLK3-225ENST00000569063 LLPHQ9BRT6 129 aaKnown RBP22.87■■□□□ 1.25
CLK3-225ENST00000569063 PRUNE2Q8WUY3 3088 aa22.86■■□□□ 1.25
CLK3-225ENST00000569063 ERVK-21P61565 698 aa22.86■■□□□ 1.25
CLK3-225ENST00000569063 PPP2R5CQ13362 524 aa22.86■■□□□ 1.25
CLK3-225ENST00000569063 TRIM29Q14134 588 aa22.86■■□□□ 1.25
CLK3-225ENST00000569063 FAM43BQ6ZT52 329 aaPredicted RBP22.86■■□□□ 1.25
CLK3-225ENST00000569063 SPRED2Q7Z698 418 aa22.86■■□□□ 1.25
CLK3-225ENST00000569063 TGS1Q96RS0 853 aaKnown RBP22.86■■□□□ 1.25
CLK3-225ENST00000569063 FTHL17Q9BXU8 183 aa22.86■■□□□ 1.25
CLK3-225ENST00000569063 PADI3Q9ULW8 664 aa22.86■■□□□ 1.25
CLK3-225ENST00000569063 UNC80Q8N2C7 3258 aa22.86■■□□□ 1.25
CLK3-225ENST00000569063 WDR81Q562E7 1941 aa22.85■■□□□ 1.25
CLK3-225ENST00000569063 UPP2O95045 317 aa22.85■■□□□ 1.25
CLK3-225ENST00000569063 KRT40Q6A162 431 aa22.85■■□□□ 1.25
CLK3-225ENST00000569063 CCDC83Q8IWF9 413 aa22.85■■□□□ 1.25
CLK3-225ENST00000569063 METTL13Q8N6R0 699 aa22.85■■□□□ 1.25
CLK3-225ENST00000569063 LINC01465Q8N7H1 131 aa22.85■■□□□ 1.25
CLK3-225ENST00000569063 HAS1Q92839 578 aa22.85■■□□□ 1.25
CLK3-225ENST00000569063 NIFKQ9BYG3 293 aaKnown RBP22.85■■□□□ 1.25
CLK3-225ENST00000569063 SH2B1Q9NRF2 756 aaPredicted RBP22.85■■□□□ 1.25
CLK3-225ENST00000569063 VAV3Q9UKW4 847 aa22.85■■□□□ 1.25
CLK3-225ENST00000569063 FAM205CA6NFA0 338 aa22.84■■□□□ 1.25
CLK3-225ENST00000569063 BTBD18B2RXH4 712 aa22.84■■□□□ 1.25
CLK3-225ENST00000569063 STBD1O95210 358 aa22.84■■□□□ 1.25
CLK3-225ENST00000569063 PAK2Q13177 524 aa22.84■■□□□ 1.25
CLK3-225ENST00000569063 DIS3L2Q8IYB7 885 aaKnown RBP22.84■■□□□ 1.25
CLK3-225ENST00000569063 YME1L1Q96TA2 773 aa22.84■■□□□ 1.25
CLK3-225ENST00000569063 CDHR5Q9HBB8 845 aa22.84■■□□□ 1.25
CLK3-225ENST00000569063 MTCH2Q9Y6C9 303 aa22.84■■□□□ 1.25
CLK3-225ENST00000569063 COL4A6Q14031 1691 aa22.84■■□□□ 1.25
CLK3-225ENST00000569063 EML1O00423 815 aa22.83■■□□□ 1.25
CLK3-225ENST00000569063 GPR32O75388 356 aa22.83■■□□□ 1.25
CLK3-225ENST00000569063 CRYBB1P53674 252 aaPredicted RBP22.83■■□□□ 1.25
CLK3-225ENST00000569063 TARBP2Q15633 366 aaKnown RBP22.83■■□□□ 1.25
CLK3-225ENST00000569063 XKR3Q5GH77 459 aa22.83■■□□□ 1.25
CLK3-225ENST00000569063 EFCAB12Q6NXP0 572 aa22.83■■□□□ 1.25
CLK3-225ENST00000569063 RTN4RL1Q86UN2 441 aaPredicted RBP22.83■■□□□ 1.25
CLK3-225ENST00000569063 ZNF710Q8N1W2 664 aa22.83■■□□□ 1.25
CLK3-225ENST00000569063 LINC01599Q8WXQ3 324 aa22.83■■□□□ 1.25
CLK3-225ENST00000569063 PPM1EQ8WY54 764 aa22.83■■□□□ 1.25
CLK3-225ENST00000569063 GINS2Q9Y248 185 aa22.83■■□□□ 1.25
CLK3-225ENST00000569063 GTPBP6O43824 516 aaPredicted RBP22.82■■□□□ 1.24
CLK3-225ENST00000569063 LPXNO60711 386 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 TMOD1P28289 359 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 CLCN3P51790 818 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 PSMC5P62195 406 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 GRB10Q13322 594 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 CCDC85BQ15834 202 aaPredicted RBP22.82■■□□□ 1.24
CLK3-225ENST00000569063 POTEDQ86YR6 584 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 SLFN12Q8IYM2 578 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 CRIPAKQ8N1N5 446 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 TMEM40Q8WWA1 233 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 TSPYL2Q9H2G4 693 aaPredicted RBP22.82■■□□□ 1.24
CLK3-225ENST00000569063 TMX1Q9H3N1 280 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 SUGCTQ9HAC7 445 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 ERVK-5Q9HDB9 667 aa22.82■■□□□ 1.24
CLK3-225ENST00000569063 TRANK1O15050 2925 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 RPS6KA5O75582 802 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 VTNP04004 478 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 FOSBP53539 338 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 RABEP1Q15276 862 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 KIZQ2M2Z5 673 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 ODR4Q5SWX8 454 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 BANK1Q8NDB2 785 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 IL27Q8NEV9 243 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 CEP89Q96ST8 783 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 MAP7D2Q96T17 732 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 LMCD1Q9NZU5 365 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 SEPT9Q9UHD8 586 aaPredicted RBP22.81■■□□□ 1.24
CLK3-225ENST00000569063 MTUS1Q9ULD2 1270 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 NOC2LQ9Y3T9 749 aaKnown RBP22.81■■□□□ 1.24
CLK3-225ENST00000569063 MYO9BQ13459 2157 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 EVPLQ92817 2033 aa22.81■■□□□ 1.24
CLK3-225ENST00000569063 A0A0C4DFX4 3053 aa22.8■■□□□ 1.24
CLK3-225ENST00000569063 MARCH6O60337 910 aa22.8■■□□□ 1.24
CLK3-225ENST00000569063 BAG4O95429 457 aaKnown RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms