RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 APOA5Q6Q788 366 aa21.28■■□□□ 1
NME3-204ENST00000563498 ATP8B4Q8TF62 1192 aa21.28■■□□□ 1
NME3-204ENST00000563498 ESYT1Q9BSJ8 1104 aa21.28■■□□□ 1
NME3-204ENST00000563498 RGS18Q9NS28 235 aa21.28■■□□□ 1
NME3-204ENST00000563498 PCDHB12Q9Y5F1 795 aa21.28■■□□□ 1
NME3-204ENST00000563498 RPS6KA5O75582 802 aa21.27■■□□□ 1
NME3-204ENST00000563498 GLP2RO95838 553 aa21.27■■□□□ 1
NME3-204ENST00000563498 CCNE2O96020 404 aa21.27■■□□□ 1
NME3-204ENST00000563498 FUT2Q10981 343 aa21.27■■□□□ 1
NME3-204ENST00000563498 CBX2Q14781 532 aaPredicted RBP21.27■■□□□ 1
NME3-204ENST00000563498 ABHD15Q6UXT9 468 aa21.27■■□□□ 1
NME3-204ENST00000563498 SLC24A5Q71RS6 500 aa21.27■■□□□ 1
NME3-204ENST00000563498 KIAA0319LQ8IZA0 1049 aa21.27■■□□□ 1
NME3-204ENST00000563498 PGBD1Q96JS3 809 aa21.27■■□□□ 1
NME3-204ENST00000563498 NOC2LQ9Y3T9 749 aaKnown RBP21.27■■□□□ 1
NME3-204ENST00000563498 TRIOO75962 3097 aa21.27■□□□□ 0.99
NME3-204ENST00000563498 PLXNA4Q9HCM2 1894 aa21.26■□□□□ 0.99
NME3-204ENST00000563498 MGEA5O60502 916 aa21.26■□□□□ 0.99
NME3-204ENST00000563498 CLK2P49760 499 aaKnown RBP21.26■□□□□ 0.99
NME3-204ENST00000563498 PKN1Q16512 942 aa21.26■□□□□ 0.99
NME3-204ENST00000563498 ZNF484Q5JVG2 852 aa21.26■□□□□ 0.99
NME3-204ENST00000563498 RBM23Q86U06 439 aaKnown RBP21.26■□□□□ 0.99
NME3-204ENST00000563498 CDCA3Q99618 268 aaPredicted RBP21.26■□□□□ 0.99
NME3-204ENST00000563498 TLE6Q9H808 572 aa21.26■□□□□ 0.99
NME3-204ENST00000563498 TLR9Q9NR96 1032 aa21.26■□□□□ 0.99
NME3-204ENST00000563498 BARHL2Q9NY43 387 aa21.26■□□□□ 0.99
NME3-204ENST00000563498 GINS2Q9Y248 185 aa21.26■□□□□ 0.99
NME3-204ENST00000563498 TECTAO75443 2155 aa21.26■□□□□ 0.99
NME3-204ENST00000563498 DENND3A2RUS2 1198 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 SMCO2A6NFE2 343 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 C9IYK1 514 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 BACH1O14867 736 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 GPR182O15218 404 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 RTN1Q16799 776 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 FNDC1Q4ZHG4 1894 aaPredicted RBP21.25■□□□□ 0.99
NME3-204ENST00000563498 PDE12Q6L8Q7 609 aaKnown RBP21.25■□□□□ 0.99
NME3-204ENST00000563498 TRIM67Q6ZTA4 783 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 MICAL1Q8TDZ2 1067 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 TMEM40Q8WWA1 233 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 ADAM2Q99965 735 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 CDHR5Q9HBB8 845 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 ZNF302Q9NR11 478 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 BARX2Q9UMQ3 279 aaPredicted RBP21.25■□□□□ 0.99
NME3-204ENST00000563498 USP15Q9Y4E8 981 aaPredicted RBP21.25■□□□□ 0.99
NME3-204ENST00000563498 V9GY48 417 aaPredicted RBP21.25■□□□□ 0.99
NME3-204ENST00000563498 WDFY4Q6ZS81 3184 aa21.25■□□□□ 0.99
NME3-204ENST00000563498 TBKBP1A7MCY6 615 aa21.24■□□□□ 0.99
NME3-204ENST00000563498 ZBTB42B2RXF5 422 aa21.24■□□□□ 0.99
NME3-204ENST00000563498 PPFIA3O75145 1194 aa21.24■□□□□ 0.99
NME3-204ENST00000563498 FGF18O76093 207 aa21.24■□□□□ 0.99
NME3-204ENST00000563498 ATF7P17544 494 aaPredicted RBP21.24■□□□□ 0.99
NME3-204ENST00000563498 ZNF76P36508 570 aa21.24■□□□□ 0.99
NME3-204ENST00000563498 SPOUT1Q5T280 376 aaKnown RBP21.24■□□□□ 0.99
NME3-204ENST00000563498 RNF20Q5VTR2 975 aa21.24■□□□□ 0.99
NME3-204ENST00000563498 MIS18BP1Q6P0N0 1132 aa21.24■□□□□ 0.99
NME3-204ENST00000563498 PDXDC2PQ6P474 469 aa21.24■□□□□ 0.99
NME3-204ENST00000563498 CCDC60Q8IWA6 550 aaPredicted RBP21.24■□□□□ 0.99
NME3-204ENST00000563498 PHF7Q9BWX1 381 aaPredicted RBP21.24■□□□□ 0.99
NME3-204ENST00000563498 ANO2Q9NQ90 1003 aa21.24■□□□□ 0.99
NME3-204ENST00000563498 ST3GAL5Q9UNP4 418 aa21.24■□□□□ 0.99
NME3-204ENST00000563498 PCDHGC5Q9Y5F6 944 aa21.24■□□□□ 0.99
NME3-204ENST00000563498 TMEM221A6NGB7 291 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 FAM86B1E9PN63 330 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 M0R296 226 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 DDX39AO00148 427 aaKnown RBP21.23■□□□□ 0.99
NME3-204ENST00000563498 DHX15O43143 795 aaKnown RBP21.23■□□□□ 0.99
NME3-204ENST00000563498 ZBTB43O43298 467 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 FAM86B2P0C5J1 330 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 CRYBB1P53674 252 aaPredicted RBP21.23■□□□□ 0.99
NME3-204ENST00000563498 FAM189BP81408 668 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 ZXDAP98168 799 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 EXOSC10Q01780 885 aaKnown RBP21.23■□□□□ 0.99
NME3-204ENST00000563498 FAM102BQ5T8I3 360 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 SUSD6Q92537 303 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 NEK1Q96PY6 1258 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 ELAC1Q9H777 363 aaKnown RBP21.23■□□□□ 0.99
NME3-204ENST00000563498 TMEM161AQ9NX61 479 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 TMEM260Q9NX78 707 aa21.23■□□□□ 0.99
NME3-204ENST00000563498 IGLV3-22A0A075B6J6 115 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 IPO5O00410 1097 aaKnown RBP21.22■□□□□ 0.99
NME3-204ENST00000563498 FSCN2O14926 492 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 C22orf31O95567 290 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 CYP3A4P08684 503 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 RCAN1P53805 252 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 DUSP6Q16828 381 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 TMEM184AQ6ZMB5 413 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 PLA2G4DQ86XP0 818 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 THNSL1Q8IYQ7 743 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 COLGALT1Q8NBJ5 622 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 CRYGNQ8WXF5 182 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 BBXQ8WY36 941 aaPredicted RBP21.22■□□□□ 0.99
NME3-204ENST00000563498 PBXIP1Q96AQ6 731 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 PRRX2Q99811 253 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 TYW1Q9NV66 732 aaKnown RBP21.22■□□□□ 0.99
NME3-204ENST00000563498 BRPF3Q9ULD4 1205 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 LZTS1Q9Y250 596 aa21.22■□□□□ 0.99
NME3-204ENST00000563498 PER2O15055 1255 aa21.21■□□□□ 0.99
NME3-204ENST00000563498 LAG3P18627 525 aa21.21■□□□□ 0.99
NME3-204ENST00000563498 ATP4AP20648 1035 aa21.21■□□□□ 0.99
NME3-204ENST00000563498 IBSPP21815 317 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms