RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 CCDC85CA6NKD9 419 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 CRTAMO95727 393 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 FAM153BP0C7A2 387 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 ECE1P42892 770 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 MRE11P49959 708 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 TGFB2P61812 414 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 ABHD18Q0P651 414 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 LSM12Q3MHD2 195 aaKnown RBP5.85□□□□□ -1.47
SCFD1-219ENST00000556413 TMEM200BQ69YZ2 307 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 FILIP1Q7Z7B0 1213 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 ZC3H7AQ8IWR0 971 aaKnown RBP5.85□□□□□ -1.47
SCFD1-219ENST00000556413 ZNF808Q8N4W9 903 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-219ENST00000556413 DHRS4Q9BTZ2 278 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 IGSF5Q9NSI5 407 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 PLA2G3Q9NZ20 509 aa5.85□□□□□ -1.47
SCFD1-219ENST00000556413 A0A0G2JNJ9 132 aa5.84□□□□□ -1.47
SCFD1-219ENST00000556413 MMEP08473 750 aa5.84□□□□□ -1.47
SCFD1-219ENST00000556413 C1SP09871 688 aa5.84□□□□□ -1.47
SCFD1-219ENST00000556413 ACRV1P26436 265 aa5.84□□□□□ -1.47
SCFD1-219ENST00000556413 MSX2P35548 267 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-219ENST00000556413 TM4SF20Q53R12 229 aa5.84□□□□□ -1.47
SCFD1-219ENST00000556413 GPR135Q8IZ08 494 aa5.84□□□□□ -1.47
SCFD1-219ENST00000556413 OR10A5Q9H207 317 aa5.84□□□□□ -1.47
SCFD1-219ENST00000556413 OR10A2Q9H208 303 aa5.84□□□□□ -1.47
SCFD1-219ENST00000556413 MSL2Q9HCI7 577 aa5.84□□□□□ -1.47
SCFD1-219ENST00000556413 Q9UFV3 132 aa5.84□□□□□ -1.47
SCFD1-219ENST00000556413 MEOX1P50221 254 aa5.83□□□□□ -1.48
SCFD1-219ENST00000556413 MOGSQ13724 837 aa5.83□□□□□ -1.48
SCFD1-219ENST00000556413 FSTL4Q6MZW2 842 aa5.83□□□□□ -1.48
SCFD1-219ENST00000556413 NOSTRINQ8IVI9 506 aa5.83□□□□□ -1.48
SCFD1-219ENST00000556413 RTKN2Q8IZC4 609 aa5.83□□□□□ -1.48
SCFD1-219ENST00000556413 CISD2Q8N5K1 135 aaKnown RBP5.83□□□□□ -1.48
SCFD1-219ENST00000556413 CACTINQ8WUQ7 758 aaKnown RBP5.83□□□□□ -1.48
SCFD1-219ENST00000556413 ASB15Q8WXK1 588 aa5.83□□□□□ -1.48
SCFD1-219ENST00000556413 PLEKHG4BQ96PX9 1271 aa5.83□□□□□ -1.48
SCFD1-219ENST00000556413 TLR9Q9NR96 1032 aa5.83□□□□□ -1.48
SCFD1-219ENST00000556413 MRPS23Q9Y3D9 190 aaKnown RBP5.83□□□□□ -1.48
SCFD1-219ENST00000556413 CCDC9Q9Y3X0 531 aaKnown RBP5.83□□□□□ -1.48
SCFD1-219ENST00000556413 SCDO00767 359 aa5.82□□□□□ -1.48
SCFD1-219ENST00000556413 HIBADHP31937 336 aaKnown RBP5.82□□□□□ -1.48
SCFD1-219ENST00000556413 MCM7P33993 719 aa5.82□□□□□ -1.48
SCFD1-219ENST00000556413 STAT5BP51692 787 aa5.82□□□□□ -1.48
SCFD1-219ENST00000556413 HGFACQ04756 655 aa5.82□□□□□ -1.48
SCFD1-219ENST00000556413 GRAMD4Q6IC98 578 aa5.82□□□□□ -1.48
SCFD1-219ENST00000556413 AMER2Q8N7J2 671 aa5.82□□□□□ -1.48
SCFD1-219ENST00000556413 OR14K1Q8NGZ2 314 aa5.82□□□□□ -1.48
SCFD1-219ENST00000556413 WDR48Q8TAF3 677 aa5.82□□□□□ -1.48
SCFD1-219ENST00000556413 CHFRQ96EP1 664 aa5.82□□□□□ -1.48
SCFD1-219ENST00000556413 SLC52A2Q9HAB3 445 aa5.82□□□□□ -1.48
SCFD1-219ENST00000556413 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-219ENST00000556413 RASSF10A6NK89 507 aa5.81□□□□□ -1.48
SCFD1-219ENST00000556413 GRM7Q14831 915 aa5.81□□□□□ -1.48
SCFD1-219ENST00000556413 LONRF2Q1L5Z9 754 aa5.81□□□□□ -1.48
SCFD1-219ENST00000556413 NBPF6Q5VWK0 638 aa5.81□□□□□ -1.48
SCFD1-219ENST00000556413 NBPF4Q96M43 638 aa5.81□□□□□ -1.48
SCFD1-219ENST00000556413 GBP4Q96PP9 640 aa5.81□□□□□ -1.48
SCFD1-219ENST00000556413 TRIM8Q9BZR9 551 aa5.81□□□□□ -1.48
SCFD1-219ENST00000556413 NELFAQ9H3P2 528 aa5.81□□□□□ -1.48
SCFD1-219ENST00000556413 AGO3Q9H9G7 860 aaKnown RBP5.81□□□□□ -1.48
SCFD1-219ENST00000556413 COQ6Q9Y2Z9 468 aa5.81□□□□□ -1.48
SCFD1-219ENST00000556413 ASB1Q9Y576 335 aa5.81□□□□□ -1.48
SCFD1-219ENST00000556413 KDM2BQ8NHM5 1336 aa5.8□□□□□ -1.48
SCFD1-219ENST00000556413 WDR33Q9C0J8 1336 aaKnown RBP5.8□□□□□ -1.48
SCFD1-219ENST00000556413 PRAMEF22A3QJZ6 481 aa5.8□□□□□ -1.48
SCFD1-219ENST00000556413 DPTQ07507 201 aa5.8□□□□□ -1.48
SCFD1-219ENST00000556413 FNDC7Q5VTL7 733 aa5.8□□□□□ -1.48
SCFD1-219ENST00000556413 HIPK4Q8NE63 616 aa5.8□□□□□ -1.48
SCFD1-219ENST00000556413 GSTCDQ8NEC7 633 aa5.8□□□□□ -1.48
SCFD1-219ENST00000556413 IKZF4Q9H2S9 585 aa5.8□□□□□ -1.48
SCFD1-219ENST00000556413 KCNH7Q9NS40 1196 aa5.8□□□□□ -1.48
SCFD1-219ENST00000556413 SIRPGQ9P1W8 387 aa5.8□□□□□ -1.48
SCFD1-219ENST00000556413 PPP1R1BQ9UD71 204 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-219ENST00000556413 NDOR1Q9UHB4 597 aa5.8□□□□□ -1.48
SCFD1-219ENST00000556413 FAM184BQ9ULE4 1060 aa5.8□□□□□ -1.48
SCFD1-219ENST00000556413 PMS2P1A4D2B8 440 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 FOXP2O15409 715 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 SLC26A4O43511 780 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 RASGRP1O95267 797 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 RBM25P49756 843 aaKnown RBP5.79□□□□□ -1.48
SCFD1-219ENST00000556413 TUBA3CQ13748 450 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 TUBA3EQ6PEY2 450 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 OVCH1Q7RTY7 1134 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 ADGRE4PQ86SQ3 457 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 SGMS1Q86VZ5 419 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 BCL6BQ8N143 479 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-219ENST00000556413 SHCBP1Q8NEM2 672 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 SLC7A14Q8TBB6 771 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 DLG3Q92796 817 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 TMEM176AQ96HP8 235 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 CEP89Q96ST8 783 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 CELF4Q9BZC1 486 aaKnown RBP5.79□□□□□ -1.48
SCFD1-219ENST00000556413 ZNF703Q9H7S9 590 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-219ENST00000556413 C11orf21Q9P2W6 132 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 HECAQ9UBI9 543 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-219ENST00000556413 B3GALT1Q9Y5Z6 326 aa5.79□□□□□ -1.48
SCFD1-219ENST00000556413 GOLGA6L22H0YM25 854 aa5.78□□□□□ -1.48
SCFD1-219ENST00000556413 EFCAB14O75071 495 aa5.78□□□□□ -1.48
SCFD1-219ENST00000556413 SDHAP31040 664 aa5.78□□□□□ -1.48
SCFD1-219ENST00000556413 HHEXQ03014 270 aa5.78□□□□□ -1.48
SCFD1-219ENST00000556413 NAALADL2Q58DX5 795 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms