RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 POTEGQ6S5H5 508 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 POTEEQ6S8J3 1075 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 TXNRD3Q86VQ6 643 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 CRNKL1Q9BZJ0 848 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 ETNK1Q9HBU6 452 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 NOP53Q9NZM5 478 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 MARF1Q9Y4F3 1742 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 MROH5Q6ZUA9 1318 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 WDR91A4D1P6 747 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 SMIM24O75264 130 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 TRIM49P0CI25 452 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 TRIM49CP0CI26 452 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 NQO1P15559 274 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 PMS2P54278 862 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 MXRA7P84157 204 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 XRCC4Q13426 336 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 PICALMQ13492 652 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 YTHDF3Q7Z739 585 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 ZSCAN29Q8IWY8 852 aaPredicted RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 NEK9Q8TD19 979 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 ARHGEF26Q96DR7 871 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 SAAL1Q96ER3 474 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 TMEM47Q9BQJ4 181 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 PYM1Q9BRP8 204 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 A1CFQ9NQ94 594 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 SEC63Q9UGP8 760 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 HDAC9Q9UKV0 1011 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 DAAM1Q9Y4D1 1078 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 PCDH11XQ9BZA7 1347 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 PCDH11YQ9BZA8 1340 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 A0A1W2PQJ5 194 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 USP17L5A8MUK1 530 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 PPIP5K2O43314 1243 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 MGRN1O60291 552 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 RTN2O75298 545 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 IL2RBP14784 551 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 ABL2P42684 1182 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 TRAPPC10P48553 1259 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 CTCFP49711 727 aaPredicted RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 MESDQ14696 234 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 EXOC3L4Q17RC7 722 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 CAVIN4Q5BKX8 364 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 DAB2IPQ5VWQ8 1189 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 REXO1Q8N1G1 1221 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 TPCN2Q8NHX9 752 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 RBM46Q8TBY0 533 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 KRT35Q92764 455 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 CELF1Q92879 486 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 FAM84AQ96KN4 292 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 ALG13Q9NP73 1137 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 USP40Q9NVE5 1235 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 CEP72Q9P209 647 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 hCG_2014768A0A024R1R8 64 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 RSPH10B2B2RC85 870 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 H2AFZP0C0S5 128 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 RSPH10BP0C881 870 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 PRLRP16471 622 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 GALCP54803 685 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 PSMD2Q13200 908 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 C2CD6Q53TS8 623 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 ANKRD20A2Q5SQ80 823 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 ERMARDQ5T6L9 678 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 ANKRD20A1Q5TYW2 823 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 ANKRD20A3Q5VUR7 823 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 PNPLA7Q6ZV29 1317 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 H2AFVQ71UI9 128 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 EGFL6Q8IUX8 553 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 CCDC26Q8TAB7 109 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 DTX3LQ8TDB6 740 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 CCSER1Q9C0I3 900 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 MAD2L2Q9UI95 211 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 NAGPAQ9UK23 515 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 GNAT1P11488 350 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 SSTR3P32745 418 aaPredicted RBP9.63□□□□□ -0.87
SYNE2-217ENST00000555022 USP11P51784 963 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 MRPL12P52815 198 aaKnown RBP9.63□□□□□ -0.87
SYNE2-217ENST00000555022 RAD23BP54727 409 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 BIRC3Q13489 604 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 BARGINQ6ZT62 677 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 UNC13DQ70J99 1090 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 VSIG1Q86XK7 387 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 KIAA0825Q8IV33 1275 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 SRRM1Q8IYB3 904 aaKnown RBP9.63□□□□□ -0.87
SYNE2-217ENST00000555022 CCDC105Q8IYK2 499 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 TTC8Q8TAM2 541 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 C1orf54Q8WWF1 131 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 C7orf25Q9BPX7 421 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 TSKSQ9UJT2 592 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 CHD4Q14839 1912 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 CYP2J2P51589 502 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 FKBP3Q00688 224 aaKnown RBP9.63□□□□□ -0.87
SYNE2-217ENST00000555022 CUL1Q13616 776 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 CYP4F22Q6NT55 531 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 CCDC50Q8IVM0 306 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 ATG4AQ8WYN0 398 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 GCNT4Q9P109 453 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 HAO1Q9UJM8 370 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 AMFRQ9UKV5 643 aa9.63□□□□□ -0.87
SYNE2-217ENST00000555022 TMEM120BA0PK00 339 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms