RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 ZNF713Q8N859 430 aaPredicted RBP27.58■■■□□ 2.01
FOXA1-204ENST00000554607 RGS18Q9NS28 235 aa27.58■■■□□ 2.01
FOXA1-204ENST00000554607 GINS2Q9Y248 185 aa27.58■■■□□ 2.01
FOXA1-204ENST00000554607 COL1A2P08123 1366 aa27.58■■■□□ 2.01
FOXA1-204ENST00000554607 DENND3A2RUS2 1198 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 LOC730098B7Z3J9 87 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 GPR182O15218 404 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 PPFIA3O75145 1194 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 AP3B2Q13367 1082 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 COL9A3Q14050 684 aaPredicted RBP27.57■■■□□ 2
FOXA1-204ENST00000554607 ZNF484Q5JVG2 852 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 SLC24A5Q71RS6 500 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 ATP8B4Q8TF62 1192 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 PGBD1Q96JS3 809 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 ESYT1Q9BSJ8 1104 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 TRIOO75962 3097 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 CNTNAP5Q8WYK1 1306 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 ZNF318Q5VUA4 2279 aa27.57■■■□□ 2
FOXA1-204ENST00000554607 SMCO2A6NFE2 343 aa27.56■■■□□ 2
FOXA1-204ENST00000554607 IBSPP21815 317 aaPredicted RBP27.56■■■□□ 2
FOXA1-204ENST00000554607 SREBF1P36956 1147 aa27.56■■■□□ 2
FOXA1-204ENST00000554607 PDE12Q6L8Q7 609 aaKnown RBP27.56■■■□□ 2
FOXA1-204ENST00000554607 TYW1BQ6NUM6 668 aa27.56■■■□□ 2
FOXA1-204ENST00000554607 ABHD15Q6UXT9 468 aa27.56■■■□□ 2
FOXA1-204ENST00000554607 KIAA0319LQ8IZA0 1049 aa27.56■■■□□ 2
FOXA1-204ENST00000554607 CDCA3Q99618 268 aaPredicted RBP27.56■■■□□ 2
FOXA1-204ENST00000554607 ADAM2Q99965 735 aa27.56■■■□□ 2
FOXA1-204ENST00000554607 BARX2Q9UMQ3 279 aaPredicted RBP27.56■■■□□ 2
FOXA1-204ENST00000554607 NOC2LQ9Y3T9 749 aaKnown RBP27.56■■■□□ 2
FOXA1-204ENST00000554607 TBKBP1A7MCY6 615 aa27.55■■■□□ 2
FOXA1-204ENST00000554607 CBX2Q14781 532 aaPredicted RBP27.55■■■□□ 2
FOXA1-204ENST00000554607 RNF20Q5VTR2 975 aa27.55■■■□□ 2
FOXA1-204ENST00000554607 APOA5Q6Q788 366 aa27.55■■■□□ 2
FOXA1-204ENST00000554607 TRIM67Q6ZTA4 783 aa27.55■■■□□ 2
FOXA1-204ENST00000554607 ANO2Q9NQ90 1003 aa27.55■■■□□ 2
FOXA1-204ENST00000554607 ZNF302Q9NR11 478 aa27.55■■■□□ 2
FOXA1-204ENST00000554607 TLR9Q9NR96 1032 aa27.55■■■□□ 2
FOXA1-204ENST00000554607 ST3GAL5Q9UNP4 418 aa27.55■■■□□ 2
FOXA1-204ENST00000554607 USP15Q9Y4E8 981 aaPredicted RBP27.55■■■□□ 2
FOXA1-204ENST00000554607 V9GY48 417 aaPredicted RBP27.55■■■□□ 2
FOXA1-204ENST00000554607 MGEA5O60502 916 aa27.54■■■□□ 2
FOXA1-204ENST00000554607 TECTAO75443 2155 aa27.54■■■□□ 2
FOXA1-204ENST00000554607 GLP2RO95838 553 aa27.54■■■□□ 2
FOXA1-204ENST00000554607 CCNE2O96020 404 aa27.54■■■□□ 2
FOXA1-204ENST00000554607 RTN1Q16799 776 aa27.54■■■□□ 2
FOXA1-204ENST00000554607 MIS18BP1Q6P0N0 1132 aa27.54■■■□□ 2
FOXA1-204ENST00000554607 PDXDC2PQ6P474 469 aa27.54■■■□□ 2
FOXA1-204ENST00000554607 WDFY4Q6ZS81 3184 aa27.54■■■□□ 2
FOXA1-204ENST00000554607 PHF7Q9BWX1 381 aaPredicted RBP27.54■■■□□ 2
FOXA1-204ENST00000554607 BARHL2Q9NY43 387 aa27.54■■■□□ 2
FOXA1-204ENST00000554607 TMEM221A6NGB7 291 aa27.53■■■□□ 2
FOXA1-204ENST00000554607 C9IYK1 514 aa27.53■■■□□ 2
FOXA1-204ENST00000554607 M0R296 226 aa27.53■■■□□ 2
FOXA1-204ENST00000554607 DDX39AO00148 427 aaKnown RBP27.53■■■□□ 2
FOXA1-204ENST00000554607 FGF18O76093 207 aa27.53■■■□□ 2
FOXA1-204ENST00000554607 THNSL1Q8IYQ7 743 aa27.53■■■□□ 2
FOXA1-204ENST00000554607 PBXIP1Q96AQ6 731 aa27.53■■■□□ 2
FOXA1-204ENST00000554607 PRRX2Q99811 253 aa27.53■■■□□ 2
FOXA1-204ENST00000554607 CDHR5Q9HBB8 845 aa27.53■■■□□ 2
FOXA1-204ENST00000554607 ZBTB43O43298 467 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 SRGAP2BP0DMP2 458 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 ATF7P17544 494 aaPredicted RBP27.52■■■□□ 2
FOXA1-204ENST00000554607 CLK2P49760 499 aaKnown RBP27.52■■■□□ 2
FOXA1-204ENST00000554607 CRYBB1P53674 252 aaPredicted RBP27.52■■■□□ 2
FOXA1-204ENST00000554607 ZXDAP98168 799 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 FUT2Q10981 343 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 FAM102BQ5T8I3 360 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 SWSAP1Q6NVH7 229 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 PLA2G4DQ86XP0 818 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 CCDC60Q8IWA6 550 aaPredicted RBP27.52■■■□□ 2
FOXA1-204ENST00000554607 TMEM40Q8WWA1 233 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 NEK1Q96PY6 1258 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 ELAC1Q9H777 363 aaKnown RBP27.52■■■□□ 2
FOXA1-204ENST00000554607 ATP6V0A4Q9HBG4 840 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 TYW1Q9NV66 732 aaKnown RBP27.52■■■□□ 2
FOXA1-204ENST00000554607 TMEM161AQ9NX61 479 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 TMEM260Q9NX78 707 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 PCDHGC5Q9Y5F6 944 aa27.52■■■□□ 2
FOXA1-204ENST00000554607 PLXNA4Q9HCM2 1894 aa27.51■■□□□ 1.99
FOXA1-204ENST00000554607 PER2O15055 1255 aa27.51■■□□□ 1.99
FOXA1-204ENST00000554607 FAM189BP81408 668 aa27.51■■□□□ 1.99
FOXA1-204ENST00000554607 DUSP6Q16828 381 aa27.51■■□□□ 1.99
FOXA1-204ENST00000554607 CKAP2LQ8IYA6 745 aa27.51■■□□□ 1.99
FOXA1-204ENST00000554607 COLGALT1Q8NBJ5 622 aa27.51■■□□□ 1.99
FOXA1-204ENST00000554607 BBXQ8WY36 941 aaPredicted RBP27.51■■□□□ 1.99
FOXA1-204ENST00000554607 FNDC1Q4ZHG4 1894 aaPredicted RBP27.51■■□□□ 1.99
FOXA1-204ENST00000554607 LAG3P18627 525 aa27.5■■□□□ 1.99
FOXA1-204ENST00000554607 SUGP1Q8IWZ8 645 aaKnown RBP27.5■■□□□ 1.99
FOXA1-204ENST00000554607 TBC1D22BQ9NU19 505 aa27.5■■□□□ 1.99
FOXA1-204ENST00000554607 PUF60Q9UHX1 559 aaKnown RBP27.5■■□□□ 1.99
FOXA1-204ENST00000554607 LZTS1Q9Y250 596 aa27.5■■□□□ 1.99
FOXA1-204ENST00000554607 FAM86B1E9PN63 330 aa27.49■■□□□ 1.99
FOXA1-204ENST00000554607 IPO5O00410 1097 aaKnown RBP27.49■■□□□ 1.99
FOXA1-204ENST00000554607 DHX15O43143 795 aaKnown RBP27.49■■□□□ 1.99
FOXA1-204ENST00000554607 CYP3A4P08684 503 aa27.49■■□□□ 1.99
FOXA1-204ENST00000554607 FAM86B2P0C5J1 330 aa27.49■■□□□ 1.99
FOXA1-204ENST00000554607 ERVFC1P60507 584 aa27.49■■□□□ 1.99
FOXA1-204ENST00000554607 EXOSC10Q01780 885 aaKnown RBP27.49■■□□□ 1.99
FOXA1-204ENST00000554607 KIZQ2M2Z5 673 aa27.49■■□□□ 1.99
FOXA1-204ENST00000554607 MCTP2Q6DN12 878 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms