RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 FAM184BQ9ULE4 1060 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 MAPK8IP1Q9UQF2 711 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 GDAQ9Y2T3 454 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 PCDHA1Q9Y5I3 950 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 FRMPD2Q68DX3 1309 aaPredicted RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 DLEC1Q9Y238 1755 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 BACH1O14867 736 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 KLRC4O43908 158 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 PPP1R12BO60237 982 aaPredicted RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 ENTPD3O75355 529 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 KRT18P05783 430 aaKnown RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 AKR1B1P15121 316 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 H2AFXP16104 143 aaPredicted RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 FXR1P51114 621 aaKnown RBP eCLIP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 DDR1Q08345 913 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 IKQ13123 557 aaPredicted RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 GRIK5Q16478 980 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 MAN2A1Q16706 1144 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 MAP9Q49MG5 647 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 NOM1Q5C9Z4 860 aaKnown RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 UTP14CQ5TAP6 766 aaKnown RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 CENPPQ6IPU0 288 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 TTI2Q6NXR4 508 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 CACNA2D4Q7Z3S7 1137 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 AMIGO3Q86WK7 504 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 MYOCDQ8IZQ8 938 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 TRIM58Q8NG06 486 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 RAD54LQ92698 747 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 CNOT6LQ96LI5 555 aaKnown RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 FAM20AQ96MK3 541 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 GPR101Q96P66 508 aaPredicted RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 ALS2CR12Q96Q35 445 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 MED15Q96RN5 788 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 ERGIC2Q96RQ1 377 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 NIFKQ9BYG3 293 aaKnown RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 RUBCNLQ9H714 662 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 SH2D4AQ9H788 454 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 HERC5Q9UII4 1024 aaKnown RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 RABGAP1Q9Y3P9 1069 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 V9GYY5 206 aaPredicted RBP4.82□□□□□ -1.64
CCDC59-204ENST00000550589 MYH2Q9UKX2 1941 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 PITPNM2Q9BZ72 1349 aa4.82□□□□□ -1.64
CCDC59-204ENST00000550589 A0A1B0GUL6 1792 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 LAMB1P07942 1786 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 BAZ2AQ9UIF9 1905 aaKnown RBP4.81□□□□□ -1.64
CCDC59-204ENST00000550589 MYH13Q9UKX3 1938 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 TTC26A0AVF1 554 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 PP2D1A8MPX8 630 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 PHF20L1A8MW92 1017 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 EIF3CLB5ME19 914 aaKnown RBP4.81□□□□□ -1.64
CCDC59-204ENST00000550589 LGR5O75473 907 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 TADA3O75528 432 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 APBA3O96018 575 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 RFX1P22670 979 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 ZNF76P36508 570 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 BAG6P46379 1132 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 MMP14P50281 582 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 EIF6P56537 245 aaKnown RBP4.81□□□□□ -1.64
CCDC59-204ENST00000550589 ICA1Q05084 483 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 STK4Q13043 487 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 VWA3BQ502W6 1294 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 CCDC122Q5T0U0 273 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 SLFN13Q68D06 897 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 APOBEC3HQ6NTF7 200 aaKnown RBP4.81□□□□□ -1.64
CCDC59-204ENST00000550589 FBXO38Q6PIJ6 1188 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 POTEAQ6S8J7 498 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 STXBP4Q6ZWJ1 553 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 SLC9A9Q8IVB4 645 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 GMCL1P1Q8NEA9 526 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 NEK11Q8NG66 645 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 ZNF507Q8TCN5 953 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 WHAMMQ8TF30 809 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 COA7Q96BR5 231 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 MTMR8Q96EF0 704 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 GMCL1Q96IK5 515 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 CEP63Q96MT8 703 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 PLIN2Q99541 437 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 EIF3CQ99613 913 aaKnown RBP4.81□□□□□ -1.64
CCDC59-204ENST00000550589 ARID3AQ99856 593 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 DESI2Q9BSY9 194 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 TANGO6Q9C0B7 1094 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 TSPAN10Q9H1Z9 355 aaPredicted RBP4.81□□□□□ -1.64
CCDC59-204ENST00000550589 NDST4Q9H3R1 872 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 VRTNQ9H8Y1 702 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 PLAGL2Q9UPG8 496 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 DNM3Q9UQ16 869 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 LY75O60449 1722 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 KIAA1551Q9HCM1 1747 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 SNED1Q8TER0 1413 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 CYP3A7-CYP3A51PA0A087WV96 503 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 ANO9A1A5B4 782 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 B4DLN1 442 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 USP17L15C9J2P7 530 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 USP17L10C9JJH3 530 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 USP17L13C9JLJ4 530 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 USP17L11C9JVI0 530 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 USP17L18D6R9N7 530 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 USP17L22D6RA61 530 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 USP17L17D6RBQ6 530 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 USP17L19D6RCP7 530 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms