RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 ZNF710Q8N1W2 664 aa16.74■□□□□ 0.27
GPN3-206ENST00000549963 DNAJB3Q8WWF6 145 aa16.74■□□□□ 0.27
GPN3-206ENST00000549963 SCLYQ96I15 445 aa16.74■□□□□ 0.27
GPN3-206ENST00000549963 ZNF396Q96N95 335 aaPredicted RBP16.74■□□□□ 0.27
GPN3-206ENST00000549963 HSD17B14Q9BPX1 270 aa16.74■□□□□ 0.27
GPN3-206ENST00000549963 POLR3CQ9BUI4 534 aaPredicted RBP16.74■□□□□ 0.27
GPN3-206ENST00000549963 WNT8AQ9H1J5 351 aa16.74■□□□□ 0.27
GPN3-206ENST00000549963 MUTP22033 750 aa16.73■□□□□ 0.27
GPN3-206ENST00000549963 YWHABP31946 246 aaKnown RBP16.73■□□□□ 0.27
GPN3-206ENST00000549963 SF3A1Q15459 793 aaKnown RBP16.73■□□□□ 0.27
GPN3-206ENST00000549963 TRIM71Q2Q1W2 868 aaKnown RBP16.73■□□□□ 0.27
GPN3-206ENST00000549963 MTERF2Q49AM1 385 aa16.73■□□□□ 0.27
GPN3-206ENST00000549963 KRT79Q5XKE5 535 aa16.73■□□□□ 0.27
GPN3-206ENST00000549963 EFCAB12Q6NXP0 572 aa16.73■□□□□ 0.27
GPN3-206ENST00000549963 RUFY4Q6ZNE9 571 aa16.73■□□□□ 0.27
GPN3-206ENST00000549963 DEFB128Q7Z7B8 93 aa16.73■□□□□ 0.27
GPN3-206ENST00000549963 TDHQ8IZJ6 230 aa16.73■□□□□ 0.27
GPN3-206ENST00000549963 CEP170P1Q96L14 293 aa16.73■□□□□ 0.27
GPN3-206ENST00000549963 NACC1Q96RE7 527 aa16.73■□□□□ 0.27
GPN3-206ENST00000549963 MAP7D2Q96T17 732 aa16.73■□□□□ 0.27
GPN3-206ENST00000549963 FAM49AQ9H0Q0 323 aaPredicted RBP16.73■□□□□ 0.27
GPN3-206ENST00000549963 LYPLA2O95372 231 aa16.72■□□□□ 0.27
GPN3-206ENST00000549963 RPA1P27694 616 aa16.72■□□□□ 0.27
GPN3-206ENST00000549963 CCT6AP40227 531 aaKnown RBP16.72■□□□□ 0.27
GPN3-206ENST00000549963 CDC42EP1Q00587 391 aa16.72■□□□□ 0.27
GPN3-206ENST00000549963 XKR9Q5GH70 373 aa16.72■□□□□ 0.27
GPN3-206ENST00000549963 FAM26DQ5JW98 314 aa16.72■□□□□ 0.27
GPN3-206ENST00000549963 IGSF22Q8N9C0 903 aa16.72■□□□□ 0.27
GPN3-206ENST00000549963 SLC7A3Q8WY07 619 aa16.72■□□□□ 0.27
GPN3-206ENST00000549963 SUGCTQ9HAC7 445 aa16.72■□□□□ 0.27
GPN3-206ENST00000549963 CYP26B1Q9NR63 512 aa16.72■□□□□ 0.27
GPN3-206ENST00000549963 ANKEF1Q9NU02 776 aa16.72■□□□□ 0.27
GPN3-206ENST00000549963 VWA3AA6NCI4 1184 aa16.71■□□□□ 0.27
GPN3-206ENST00000549963 ZBTB42B2RXF5 422 aa16.71■□□□□ 0.27
GPN3-206ENST00000549963 C22orf31O95567 290 aa16.71■□□□□ 0.27
GPN3-206ENST00000549963 CTSHP09668 335 aa16.71■□□□□ 0.27
GPN3-206ENST00000549963 ACRP10323 421 aa16.71■□□□□ 0.27
GPN3-206ENST00000549963 RFC5P40937 340 aa16.71■□□□□ 0.27
GPN3-206ENST00000549963 MRPS6P82932 125 aaKnown RBP16.71■□□□□ 0.27
GPN3-206ENST00000549963 TARBP2Q15633 366 aaKnown RBP16.71■□□□□ 0.27
GPN3-206ENST00000549963 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
GPN3-206ENST00000549963 ZNF365Q70YC5 407 aa16.71■□□□□ 0.27
GPN3-206ENST00000549963 ANO5Q75V66 913 aa16.71■□□□□ 0.27
GPN3-206ENST00000549963 CATSPER3Q86XQ3 398 aa16.71■□□□□ 0.27
GPN3-206ENST00000549963 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
GPN3-206ENST00000549963 WNT8BQ93098 351 aa16.71■□□□□ 0.27
GPN3-206ENST00000549963 AK8Q96MA6 479 aa16.71■□□□□ 0.27
GPN3-206ENST00000549963 STBD1O95210 358 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 F13A1P00488 732 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 ANP32AP39687 249 aaKnown RBP16.7■□□□□ 0.26
GPN3-206ENST00000549963 POLGP54098 1239 aaPredicted RBP16.7■□□□□ 0.26
GPN3-206ENST00000549963 CEBPZQ03701 1054 aaKnown RBP16.7■□□□□ 0.26
GPN3-206ENST00000549963 SHHQ15465 462 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 TMEM240Q5SV17 173 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 ODR4Q5SWX8 454 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 ATL3Q6DD88 541 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 KIAA0319LQ8IZA0 1049 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 SNX29Q8TEQ0 813 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 CDK5RAP3Q96JB5 506 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 RNPC3Q96LT9 517 aaKnown RBP16.7■□□□□ 0.26
GPN3-206ENST00000549963 CELF4Q9BZC1 486 aaKnown RBP16.7■□□□□ 0.26
GPN3-206ENST00000549963 PRO3102Q9H379 93 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 AKT3Q9Y243 479 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 ATP6V1DQ9Y5K8 247 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 TRPV2Q9Y5S1 764 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 CLIC4Q9Y696 253 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 SCN5AQ14524 2016 aa16.7■□□□□ 0.26
GPN3-206ENST00000549963 TANC1Q9C0D5 1861 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 GAS2O43903 313 aaKnown RBP16.69■□□□□ 0.26
GPN3-206ENST00000549963 EFCAB14O75071 495 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 MAFO75444 373 aaPredicted RBP16.69■□□□□ 0.26
GPN3-206ENST00000549963 SPATA31C1P0DKV0 1188 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 LONP1P36776 959 aaKnown RBP16.69■□□□□ 0.26
GPN3-206ENST00000549963 IKBKEQ14164 716 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 PLA2G4FQ68DD2 849 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 FAM173BQ6P4H8 233 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 FAM43BQ6ZT52 329 aaPredicted RBP16.69■□□□□ 0.26
GPN3-206ENST00000549963 KCTD17Q8N5Z5 321 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 TCP11Q8WWU5 503 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 SEPT8Q92599 483 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 ZBTB10Q96DT7 871 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.69■□□□□ 0.26
GPN3-206ENST00000549963 NT5C3AQ9H0P0 336 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 DNM3Q9UQ16 869 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 CDY2AQ9Y6F7 541 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 SQORQ9Y6N5 450 aa16.69■□□□□ 0.26
GPN3-206ENST00000549963 SLC26A4O43511 780 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 MED24O75448 989 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 CHRNA1P02708 482 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 CXCL10P02778 98 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 UBA7P41226 1012 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 EPHB4P54760 987 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 NPEPPSP55786 919 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 TMEM62Q0P6H9 643 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 STK38Q15208 465 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 IL17AQ16552 155 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 CNKSR3Q6P9H4 555 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 C16orf59Q7L2K0 433 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms