RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 CHST13Q8NET6 341 aa23.04■■□□□ 1.28
RITA1-201ENST00000548278 RDM1Q8NG50 284 aa23.04■■□□□ 1.28
RITA1-201ENST00000548278 NEK11Q8NG66 645 aa23.04■■□□□ 1.28
RITA1-201ENST00000548278 BAP1Q92560 729 aa23.04■■□□□ 1.28
RITA1-201ENST00000548278 SENP7Q9BQF6 1050 aa23.04■■□□□ 1.28
RITA1-201ENST00000548278 STRA6Q9BX79 667 aa23.04■■□□□ 1.28
RITA1-201ENST00000548278 ARMCX3Q9UH62 379 aaPredicted RBP23.04■■□□□ 1.28
RITA1-201ENST00000548278 SLC16A3O15427 465 aaKnown RBP23.03■■□□□ 1.28
RITA1-201ENST00000548278 CCDC170Q8IYT3 715 aa23.03■■□□□ 1.28
RITA1-201ENST00000548278 NHEJ1Q9H9Q4 299 aaPredicted RBP23.03■■□□□ 1.28
RITA1-201ENST00000548278 ELP3Q9H9T3 547 aa23.03■■□□□ 1.28
RITA1-201ENST00000548278 WDR81Q562E7 1941 aa23.03■■□□□ 1.28
RITA1-201ENST00000548278 CLIC2O15247 247 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 NOL4O94818 638 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 SLU7O95391 586 aaKnown RBP23.02■■□□□ 1.28
RITA1-201ENST00000548278 KCNA2P16389 499 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 PPATQ06203 517 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 KCNH2Q12809 1159 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 DPY19L2Q6NUT2 758 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 STXBP4Q6ZWJ1 553 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 USP50Q70EL3 339 aaPredicted RBP23.02■■□□□ 1.28
RITA1-201ENST00000548278 ZNF710Q8N1W2 664 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 CDCA5Q96FF9 252 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 CLMNQ96JQ2 1002 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 MOV10L1Q9BXT6 1211 aaKnown RBP23.02■■□□□ 1.28
RITA1-201ENST00000548278 IKZF4Q9H2S9 585 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 A0A0G2JLL6 359 aaPredicted RBP23.02■■□□□ 1.28
RITA1-201ENST00000548278 IRF6O14896 467 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 PPP1R37O75864 691 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 ABL1P00519 1130 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 CASP4P49662 377 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 RBM10P98175 930 aaKnown RBP23.02■■□□□ 1.28
RITA1-201ENST00000548278 ARHGAP29Q52LW3 1261 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 PRRT2Q7Z6L0 340 aaPredicted RBP23.02■■□□□ 1.28
RITA1-201ENST00000548278 KSR1Q8IVT5 923 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 TCEAL9Q9UHQ7 104 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 PCDHB13Q9Y5F0 798 aa23.02■■□□□ 1.28
RITA1-201ENST00000548278 KIF5CO60282 957 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 STAM2O75886 525 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 PPP2R3AQ06190 1150 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 ERO1BQ86YB8 467 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 ZC3H15Q8WU90 426 aaKnown RBP23.01■■□□□ 1.27
RITA1-201ENST00000548278 BTBD7Q9P203 1132 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 TMEM150BA6NC51 233 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 PEX10O60683 326 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 URI1O94763 535 aaPredicted RBP23.01■■□□□ 1.27
RITA1-201ENST00000548278 CYLC1P35663 651 aaPredicted RBP23.01■■□□□ 1.27
RITA1-201ENST00000548278 HERVK_113P62684 666 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 NCBP1Q09161 790 aaKnown RBP23.01■■□□□ 1.27
RITA1-201ENST00000548278 GADL1Q6ZQY3 521 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 RRAGAQ7L523 313 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 ANKRD13AQ8IZ07 590 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 PROCA1Q8NCQ7 364 aaPredicted RBP23.01■■□□□ 1.27
RITA1-201ENST00000548278 OTUD5Q96G74 571 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 ERO1AQ96HE7 468 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 LSM14BQ9BX40 385 aaKnown RBP23.01■■□□□ 1.27
RITA1-201ENST00000548278 METTL14Q9HCE5 456 aaKnown RBP23.01■■□□□ 1.27
RITA1-201ENST00000548278 CEP72Q9P209 647 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 PCDHA10Q9Y5I2 948 aa23.01■■□□□ 1.27
RITA1-201ENST00000548278 NFASCO94856 1347 aa23■■□□□ 1.27
RITA1-201ENST00000548278 LRRC53A6NM62 1247 aa23■■□□□ 1.27
RITA1-201ENST00000548278 EPB41P11171 864 aaKnown RBP23■■□□□ 1.27
RITA1-201ENST00000548278 EPHX2P34913 555 aa23■■□□□ 1.27
RITA1-201ENST00000548278 PDXDC1Q6P996 788 aa23■■□□□ 1.27
RITA1-201ENST00000548278 MOB2Q70IA6 237 aa23■■□□□ 1.27
RITA1-201ENST00000548278 MAEAQ7L5Y9 396 aa23■■□□□ 1.27
RITA1-201ENST00000548278 RIOX2Q8IUF8 465 aa23■■□□□ 1.27
RITA1-201ENST00000548278 BORCS6Q96GS4 357 aa23■■□□□ 1.27
RITA1-201ENST00000548278 CDHR1Q96JP9 859 aa23■■□□□ 1.27
RITA1-201ENST00000548278 CRACR2AQ9BSW2 395 aa23■■□□□ 1.27
RITA1-201ENST00000548278 ANKEF1Q9NU02 776 aa23■■□□□ 1.27
RITA1-201ENST00000548278 EIF3CLB5ME19 914 aaKnown RBP22.99■■□□□ 1.27
RITA1-201ENST00000548278 CXCL11O14625 94 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 BACH1O14867 736 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 USO1O60763 962 aaKnown RBP22.99■■□□□ 1.27
RITA1-201ENST00000548278 MAPTP10636 758 aaKnown RBP22.99■■□□□ 1.27
RITA1-201ENST00000548278 NAA30Q147X3 362 aaPredicted RBP22.99■■□□□ 1.27
RITA1-201ENST00000548278 UTP14CQ5TAP6 766 aaKnown RBP22.99■■□□□ 1.27
RITA1-201ENST00000548278 IWS1Q96ST2 819 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 EIF3CQ99613 913 aaKnown RBP22.99■■□□□ 1.27
RITA1-201ENST00000548278 LARSQ9P2J5 1176 aaKnown RBP22.99■■□□□ 1.27
RITA1-201ENST00000548278 DOCK5Q9H7D0 1870 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 SPDYE5A6NIY4 337 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 SPATA31C2B4DYI2 1134 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 AFPP02771 609 aaKnown RBP22.99■■□□□ 1.27
RITA1-201ENST00000548278 XRCC5P13010 732 aaKnown RBP22.99■■□□□ 1.27
RITA1-201ENST00000548278 NF2P35240 595 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 KRT83P78385 493 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 ZNF662Q6ZS27 426 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 SMAP1Q8IYB5 467 aaPredicted RBP22.99■■□□□ 1.27
RITA1-201ENST00000548278 DNERQ8NFT8 737 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 ANKRD7Q92527 254 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 SH2D3AQ9BRG2 576 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 TIPINQ9BVW5 301 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 AGPAT3Q9NRZ7 376 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 DMAC2Q9NW81 257 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 ARHGAP20Q9P2F6 1191 aa22.99■■□□□ 1.27
RITA1-201ENST00000548278 PLEKP08567 350 aaPredicted RBP22.98■■□□□ 1.27
RITA1-201ENST00000548278 PLS3P13797 630 aa22.98■■□□□ 1.27
RITA1-201ENST00000548278 HS2ST1Q7LGA3 356 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms